RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 UCP3P55916 312 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 ASPHD2Q6ICH7 369 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 DMRTA2Q96SC8 542 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 MRPS16Q9Y3D3 137 aaKnown RBP8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.09
CLTCL1-211ENST00000621271 IGHV1-46P01743 117 aa8.21□□□□□ -1.09
CLTCL1-211ENST00000621271 COX6CP09669 75 aa8.21□□□□□ -1.09
CLTCL1-211ENST00000621271 C1QTNF9P0C862 333 aa8.21□□□□□ -1.09
CLTCL1-211ENST00000621271 STAG3L2P0CL84 134 aa8.21□□□□□ -1.09
CLTCL1-211ENST00000621271 LEMD1Q68G75 181 aa8.21□□□□□ -1.09
CLTCL1-211ENST00000621271 PGLYRP4Q96LB8 373 aa8.21□□□□□ -1.09
CLTCL1-211ENST00000621271 A0A0G2JNJ9 132 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 TMEM14DPA8MWL7 114 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 TCF21O43680 179 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 DUSP14O95147 198 aaKnown RBP8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 RND3P61587 244 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 REC114Q7Z4M0 266 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 SMIM12Q96EX1 92 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 SMIM8Q96KF7 97 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 VGLL1Q99990 258 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 Q9UFV3 132 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 DIRC3C9JPN6 131 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 M0R381 172 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 LILRA1O75019 489 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 RHOGP84095 191 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 MEF2BQ02080 365 aaPredicted RBP8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 DTX2Q86UW9 622 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 LINC01356Q8N9X3 169 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 IGKV1D-43A0A0B4J1Z2 117 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 ARL14EPLP0DKL9 152 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 SGK494Q96LW2 274 aa8.21□□□□□ -1.1
CLTCL1-211ENST00000621271 IGLV3-32A0A0A0MS00 114 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 EFNB1P98172 346 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 RARRES2Q99969 163 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 PARP14Q460N5 1801 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 LGALS3P17931 250 aaKnown RBP8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 Q5PR19 223 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 WDR82Q6UXN9 313 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 NR2C2APQ86WQ0 139 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 KLK15Q9H2R5 256 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 ESPL1Q14674 2120 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 GPR179Q6PRD1 2367 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 TRAV14DV4A0A0A6YYC5 116 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 RBFOX2O43251 390 aaKnown RBP eCLIP8.2□□□□□ -1.18e-6■■□□□ 11.5
CLTCL1-211ENST00000621271 PAX1P15863 534 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 C2orf68Q2NKX9 166 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 TEX45Q8NA69 505 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 SPSB4Q96A44 273 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 ALKBH7Q9BT30 221 aaPredicted RBP8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 SDF2L1Q9HCN8 221 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 A0A1B0GV90 55 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 TIMM23O14925 209 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 MT-ND6P03923 174 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 NMUP48645 174 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 LINC00469Q8N7U9 141 aa8.2□□□□□ -1.1
CLTCL1-211ENST00000621271 TRAV24A0A0B4J272 114 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 CRYBB3P26998 211 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 WBP1Q96G27 269 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 CRIM1Q9NZV1 1036 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 MYOFQ9NZM1 2061 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 IFITM10A6NMD0 228 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 CRPP02741 224 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 RNASE4P34096 147 aaKnown RBP8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 TNFRSF14Q92956 283 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 TRBV20OR9-2A0A075B6H5 130 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 TRAV41A0A0B4J266 112 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 RNF222A6NCQ9 220 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 RNF223E7ERA6 249 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 NBEAP1P0C6P0 100 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 OR13C6PQ8NH95 151 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 RNASEH2CQ8TDP1 164 aaKnown RBP8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 ARID2Q68CP9 1835 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 TRGV4A0A0C4DH28 118 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 SRSF6Q13247 344 aaKnown RBP8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 CFAP161Q6P656 301 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 VMO1Q7Z5L0 202 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 GLRX5Q86SX6 157 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 HSPB9Q9BQS6 159 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 EP400Q96L91 3159 aa8.19□□□□□ -1.1
CLTCL1-211ENST00000621271 NBASA2RRP1 2371 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 LINC00587B1AMM8 73 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 H3BUX3 64 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 HLA-DRB1P01911 266 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 OR9G9P0C7N8 305 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 LEPP41159 167 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 RPS11P62280 158 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 SAA2-SAA4A0A096LPE2 208 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 A6NJY4 79 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 C17orf98A8MV24 154 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 IL6RP08887 468 aaPredicted RBP8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 SAA2P0DJI9 122 aaPredicted RBP8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 FHITP49789 147 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 LINC00527Q9UJ94 153 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 H3BVH4 76 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 NDUFS8O00217 210 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 RRHO14718 337 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 SAA1P0DJI8 122 aaPredicted RBP8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 TDGF1P13385 188 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 CACNA1HO95180 2353 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms