RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 HSPE1P61604 102 aaKnown RBP8.07□□□□□ -1.12
VTA1-205ENST00000620996 C10orf91Q5T1B1 145 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 C11orf71Q6IPW1 123 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 ZNF841Q6ZN19 808 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 IGFBPL1Q8WX77 278 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 RAB24Q969Q5 203 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 CLEC7AQ9BXN2 247 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 CHODLQ9H9P2 273 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 GNG13Q9P2W3 67 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 PRNDQ9UKY0 176 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 ZFP92A6NM28 416 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 C22orf46C9J442 243 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 SLC25A17O43808 307 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 RPLP1P05386 114 aaKnown RBP8.07□□□□□ -1.12
VTA1-205ENST00000620996 LIPFP07098 398 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 APELAP0DMC3 54 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 DLX6P56179 175 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 FFAR4Q5NUL3 377 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 SLC24A4Q8NFF2 622 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 RPEQ96AT9 228 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 NABP2Q9BQ15 211 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 SSBP3Q9BWW4 388 aaPredicted RBP8.07□□□□□ -1.12
VTA1-205ENST00000620996 SLC25A22Q9H936 323 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 FAM90A9PA6NNJ1 464 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 CYB5BO43169 146 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BKO60814 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 KBTBD11O94819 623 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BJP06899 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BOP23527 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 NPY1RP25929 384 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BBP33778 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BDP58876 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BCP62807 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 GNB1P62873 340 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST2H2BEQ16778 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 ATP6V1FQ16864 119 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.07□□□□□ -1.12
VTA1-205ENST00000620996 ZNF787Q6DD87 383 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST3H2BBQ8N257 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BHQ93079 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BNQ99877 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BMQ99879 126 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 WASHC3Q9Y3C0 194 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 INSIG2Q9Y5U4 225 aa8.07□□□□□ -1.12
VTA1-205ENST00000620996 LOC105371242A0A075B767 164 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 UPK2O00526 184 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 CA2P00918 260 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 DEFA4P12838 97 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 KLRD1Q13241 179 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 OR4C13Q8NGP0 309 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 FOXA2Q9Y261 457 aaPredicted RBP8.06□□□□□ -1.12
VTA1-205ENST00000620996 MED13LQ71F56 2210 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 ARHGAP32A7KAX9 2087 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 CD1BP29016 333 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 C10orf55Q5SWW7 151 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 LFNGQ8NES3 379 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 OR10W1Q8NGF6 305 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 OSR1Q8TAX0 266 aaPredicted RBP8.06□□□□□ -1.12
VTA1-205ENST00000620996 LPAR2Q9HBW0 351 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 SLC39A9Q9NUM3 307 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 HILPDAQ9Y5L2 63 aa8.06□□□□□ -1.12
VTA1-205ENST00000620996 VDAC2P45880 294 aaPredicted RBP8.05□□□□□ -1.12
VTA1-205ENST00000620996 LCN2P80188 198 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 PLGLAQ15195 96 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 PDLIM3Q53GG5 364 aaPredicted RBP8.05□□□□□ -1.12
VTA1-205ENST00000620996 TMEM41BQ5BJD5 291 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 SSX7Q7RTT5 188 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 ZNF429Q86V71 674 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 C11orf42Q8N5U0 333 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 OR1L6Q8NGR2 347 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 NPCDR1Q9BY65 106 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 TMEM14BQ9NUH8 114 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 TEX50A0A1B0GTY4 177 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 RBFOX3A6NFN3 312 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 C17orf112F2Z3M2 114 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 ACTL6BO94805 426 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 RPL8P62917 257 aaKnown RBP8.05□□□□□ -1.12
VTA1-205ENST00000620996 DTX2Q86UW9 622 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 OR52E5Q8NH55 327 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 SSMEM1Q8WWF3 244 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 RCC1LQ96I51 464 aaKnown RBP8.05□□□□□ -1.12
VTA1-205ENST00000620996 RITA1Q96K30 269 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 MYO18BQ8IUG5 2567 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 TGIF2-C20orf24A0A0A6YYL0 155 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 TMEM238LA0A1B0GVL6 79 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 MAP1LC3B2A6NCE7 125 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 PMS2P5A8MQ11 134 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 HBE1P02100 147 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 HLA-DRB5Q30154 266 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 VMA21Q3ZAQ7 101 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 ACSM6Q6P461 480 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 PDPNQ86YL7 162 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 COMMD1Q8N668 190 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 OR5AN1Q8NGI8 311 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 OR10G4Q8NGN3 311 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 OR10G9Q8NGN4 311 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 OR10G7Q8NGN6 311 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 PSMG3Q9BT73 122 aaPredicted RBP8.05□□□□□ -1.12
VTA1-205ENST00000620996 MAP1LC3BQ9GZQ8 125 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 PATZ1Q9HBE1 687 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms