RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 RPL8P62917 257 aaKnown RBP10.92□□□□□ -0.66
MSH6-214ENST00000616033 Q0VFX4 171 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 EFNB3Q15768 340 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 FAM168AQ92567 244 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 GUCD1Q96NT3 240 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 ZNF355PQ9NSJ1 428 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 GAGE12BA1L429 117 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 Q6ZR03 302 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 FNDC4Q9H6D8 234 aaPredicted RBP10.91□□□□□ -0.66
MSH6-214ENST00000616033 LOXL2Q9Y4K0 774 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 MPC1Q9Y5U8 109 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 RIF1Q5UIP0 2472 aaKnown RBP10.91□□□□□ -0.66
MSH6-214ENST00000616033 ZNF324O75467 553 aaPredicted RBP10.91□□□□□ -0.66
MSH6-214ENST00000616033 AGFG2O95081 481 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 PLAUP00749 431 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 CA2P00918 260 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 STAG3L2P0CL84 134 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 STAG3L3P0CL85 134 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 CD99P14209 185 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 TSPOP30536 169 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 SELENOVP59797 346 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 ERVK-16P61578 105 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 TCTEX1D1Q8N7M0 179 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 GP6Q9HCN6 339 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 NAV3Q8IVL0 2385 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 APOA2P02652 100 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 APCSP02743 223 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 TNXAQ16473 311 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 SLC25A40Q8TBP6 338 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 KCNS1Q96KK3 526 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 SLC45A2Q9UMX9 530 aa10.91□□□□□ -0.66
MSH6-214ENST00000616033 TET2Q6N021 2002 aaPredicted RBP10.91□□□□□ -0.66
MSH6-214ENST00000616033 FOXF2Q12947 444 aa10.9□□□□□ -0.66
MSH6-214ENST00000616033 IBA57Q5T440 356 aaKnown RBP10.9□□□□□ -0.66
MSH6-214ENST00000616033 TSKUQ8WUA8 353 aa10.9□□□□□ -0.66
MSH6-214ENST00000616033 RAB37Q96AX2 223 aa10.9□□□□□ -0.66
MSH6-214ENST00000616033 IGHV3OR15-7A0A075B7D8 119 aa10.9□□□□□ -0.66
MSH6-214ENST00000616033 SLAQ13239 276 aa10.9□□□□□ -0.66
MSH6-214ENST00000616033 SRSF7Q16629 238 aaKnown RBP eCLIP10.9□□□□□ -0.66
MSH6-214ENST00000616033 KRTAP27-1Q3LI81 207 aa10.9□□□□□ -0.66
MSH6-214ENST00000616033 KIR3DL3Q8N743 410 aa10.9□□□□□ -0.66
MSH6-214ENST00000616033 ENY2Q9NPA8 101 aa10.9□□□□□ -0.66
MSH6-214ENST00000616033 POLDIP2Q9Y2S7 368 aa10.9□□□□□ -0.66
MSH6-214ENST00000616033 CHTOPQ9Y3Y2 248 aaKnown RBP10.9□□□□□ -0.66
MSH6-214ENST00000616033 BMPR1BO00238 502 aa10.9□□□□□ -0.67
MSH6-214ENST00000616033 LAMTOR5O43504 91 aa10.9□□□□□ -0.67
MSH6-214ENST00000616033 TOX4O94842 621 aa10.9□□□□□ -0.67
MSH6-214ENST00000616033 RHOBP62745 196 aa10.9□□□□□ -0.67
MSH6-214ENST00000616033 MOB1BQ7L9L4 216 aa10.9□□□□□ -0.67
MSH6-214ENST00000616033 Q8N7P7 452 aa10.9□□□□□ -0.67
MSH6-214ENST00000616033 CDC42EP3Q9UKI2 254 aa10.9□□□□□ -0.67
MSH6-214ENST00000616033 V9GYV3 84 aa10.9□□□□□ -0.67
MSH6-214ENST00000616033 MUC21A0A0G2JKD1 596 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 MUC21A0A140T8X8 626 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 ZNF137PP52743 207 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 NHLH1Q02575 133 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 MUC21Q5SSG8 566 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 KLHDC1Q8N7A1 406 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 K7EP13 123 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 EPHA8P29322 1005 aaPredicted RBP10.89□□□□□ -0.67
MSH6-214ENST00000616033 ARR3P36575 388 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 UTF1Q5T230 341 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 Q8N976 141 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 OR2T6Q8NHC8 308 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 SVIPQ8NHG7 77 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 OR8B2Q96RD0 313 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 TAAR6Q96RI8 345 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 TRAV5A0A0B4J249 113 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 hDV102S1A0JD36 115 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 C10orf142B7Z368 130 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 H3BTX0 84 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 CSN3P07498 182 aa10.89□□□□□ -0.67
MSH6-214ENST00000616033 MT-CO2P00403 227 aa10.88□□□□□ -0.67
MSH6-214ENST00000616033 TEPPQ6URK8 271 aa10.88□□□□□ -0.67
MSH6-214ENST00000616033 COQ2Q96H96 371 aa10.88□□□□□ -0.67
MSH6-214ENST00000616033 CFAP47Q6ZTR5 3102 aa10.88□□□□□ -0.67
MSH6-214ENST00000616033 IGLL1P15814 213 aa10.88□□□□□ -0.67
MSH6-214ENST00000616033 MPV17P39210 176 aa10.88□□□□□ -0.67
MSH6-214ENST00000616033 OR1C1Q15619 314 aa10.88□□□□□ -0.67
MSH6-214ENST00000616033 TMEM136Q6ZRR5 245 aa10.88□□□□□ -0.67
MSH6-214ENST00000616033 CHRDL1Q9BU40 450 aa10.88□□□□□ -0.67
MSH6-214ENST00000616033 RAB31Q13636 194 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 NPVFQ9HCQ7 196 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 DUSP13Q9UII6 198 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 TCF19Q9Y242 345 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 OOEPA6NGQ2 149 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 NDUFS8O00217 210 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 CA7P43166 264 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 SAMD13Q5VXD3 122 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 AP1S3Q96PC3 154 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 PRO3102Q9H379 93 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 NCOR1P1Q9H4R4 102 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 SH2D2AQ9NP31 389 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 TMEM140Q9NV12 185 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 BOKQ9UMX3 212 aaPredicted RBP10.87□□□□□ -0.67
MSH6-214ENST00000616033 SMG1Q96Q15 3661 aaKnown RBP10.87□□□□□ -0.67
MSH6-214ENST00000616033 PPIAL4DF5H284 164 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 SPINT2O43291 252 aa10.87□□□□□ -0.67
MSH6-214ENST00000616033 OPRK1P41145 380 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms