RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 VCX2Q9H322 139 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 ASXL3Q9C0F0 2248 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 GCSAMLQ5JQS6 135 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 MAFAQ8NHW3 353 aaPredicted RBP15.85■□□□□ 0.13
SPAST-203ENST00000615843 DEPPQ9NTK1 212 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 TIMP3P35625 211 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 NUDT11Q96G61 164 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 GREB1LQ9C091 1923 aaPredicted RBP15.84■□□□□ 0.13
SPAST-203ENST00000615843 APOMO95445 188 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 TMEM256Q8N2U0 113 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 CIARTQ8N365 385 aaPredicted RBP15.84■□□□□ 0.13
SPAST-203ENST00000615843 RAB9AP51151 201 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 ACTL10Q5JWF8 245 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 CDCP2Q5VXM1 449 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 PMS2CLQ68D20 193 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 PNKDQ8N490 385 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 ELOVL5Q9NYP7 299 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 SVILO95425 2214 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 FAM106CPP0CH98 169 aa15.84■□□□□ 0.13
SPAST-203ENST00000615843 GPX1P07203 203 aa15.83■□□□□ 0.13
SPAST-203ENST00000615843 DNM1P46Q6ZS02 220 aa15.83■□□□□ 0.13
SPAST-203ENST00000615843 GDF15Q99988 308 aa15.83■□□□□ 0.13
SPAST-203ENST00000615843 AHRRA9YTQ3 701 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 SEC11AP67812 179 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 RNFT1Q5M7Z0 435 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 COPS9Q8WXC6 57 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 WDR83OSQ9Y284 106 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 TIAF1O95411 115 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 SCGB3A1Q96QR1 104 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 Q9H3A6 140 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 A0A1W2PQM1 296 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 DCTN5Q9BTE1 182 aa15.83■□□□□ 0.12
SPAST-203ENST00000615843 GNG5P63218 68 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 FOXC1Q12948 553 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 NRN1LQ496H8 165 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 RAMP3O60896 148 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 RFPL3SP0C7P2 107 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 TIMM23BQ5SRD1 257 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 ICE1Q9Y2F5 2266 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 IGKV3D-15A0A087WSY6 115 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 A0A1W2PRE2 83 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 TMEM50AO95807 157 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 IGKV3-15P01624 115 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 LINC00271P0C7V0 271 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 GZMBP10144 247 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 FAM166AQ6J272 317 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 ZNF703Q9H7S9 590 aaPredicted RBP15.82■□□□□ 0.12
SPAST-203ENST00000615843 RFNGQ9Y644 331 aa15.82■□□□□ 0.12
SPAST-203ENST00000615843 NPIPB11E5RHQ5 1161 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 TSPOP30536 169 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 PAPPA-AS1Q5QFB9 102 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 LINC01551Q86U37 167 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 PARP14Q460N5 1801 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 NDUFS8O00217 210 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 TGFAP01135 160 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 EFNB3Q15768 340 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 MYOFQ9NZM1 2061 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 FAM74A4Q5TZK3 123 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 MRPL52Q86TS9 123 aaKnown RBP15.81■□□□□ 0.12
SPAST-203ENST00000615843 RNASEH2CQ8TDP1 164 aaKnown RBP15.81■□□□□ 0.12
SPAST-203ENST00000615843 CHCHD1Q96BP2 118 aaKnown RBP15.81■□□□□ 0.12
SPAST-203ENST00000615843 SLX1AQ9BQ83 275 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 EREGO14944 169 aa15.81■□□□□ 0.12
SPAST-203ENST00000615843 GBF1Q92538 1859 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 FER1L6-AS1Q8NA97 138 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
SPAST-203ENST00000615843 NDUFA3O95167 84 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 CTSSP25774 331 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 TDGF1P3P51864 188 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 MEIG1Q5JSS6 88 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 IGHV3-35A0A0C4DH35 117 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 LEPP41159 167 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 WBP1Q96G27 269 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 CLEC7AQ9BXN2 247 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 LPAR2Q9HBW0 351 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 SNRNP200O75643 2136 aaKnown RBP15.8■□□□□ 0.12
SPAST-203ENST00000615843 HBDP02042 147 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 ZNF56Q15929 161 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 FADS6Q8N9I5 356 aa15.8■□□□□ 0.12
SPAST-203ENST00000615843 PPIAL4CA0A0B4J2A2 164 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 PPIAL4GP0DN37 164 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 GEMIN7Q9H840 131 aaKnown RBP15.79■□□□□ 0.12
SPAST-203ENST00000615843 LRRC37AA6NMS7 1700 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 LYL1P12980 280 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 CACNA1DQ01668 2161 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.79■□□□□ 0.12
SPAST-203ENST00000615843 HSD52Q0P140 79 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 RPP25LQ8N5L8 163 aaKnown RBP15.79■□□□□ 0.12
SPAST-203ENST00000615843 SEMA5BQ9P283 1151 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 EPDR1Q9UM22 224 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 SBF2Q86WG5 1849 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 KIF26BQ2KJY2 2108 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 MS4A6AQ9H2W1 248 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 CEP290O15078 2479 aa15.79■□□□□ 0.12
SPAST-203ENST00000615843 FAM181BA6NEQ2 426 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 CACNG7P62955 275 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 MST1LQ2TV78 715 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 DYNLRB2Q8TF09 96 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 C15orf61A6NNL5 157 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms