RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 JMJD8Q96S16 334 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 TTC32Q5I0X7 151 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 OR52E5Q8NH55 327 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 PINLYPA6NC86 204 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 ZNF660Q6AZW8 331 aaPredicted RBP15.7■□□□□ 0.1
GABPB1-212ENST00000615671 POC1AQ8NBT0 407 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 PPP1R3EQ9H7J1 279 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 TM4SF5O14894 197 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 OR11H4Q8NGC9 324 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 CXorf65A6NEN9 183 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 NBR2O15453 112 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 ZNF414Q96IQ9 312 aa15.7■□□□□ 0.1
GABPB1-212ENST00000615671 ERVK11-1P61568 191 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 TBR1Q16650 682 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 OR9G4Q8NGQ1 327 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 ALX4Q9H161 411 aaPredicted RBP15.69■□□□□ 0.1
GABPB1-212ENST00000615671 SCN8AQ9UQD0 1980 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 H2BFSP57053 126 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 TMEM95Q3KNT9 176 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 OR10J3Q5JRS4 329 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 LINC01590Q5TEZ4 76 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 SFTA2Q6UW10 78 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 MESP1Q9BRJ9 268 aa15.69■□□□□ 0.1
GABPB1-212ENST00000615671 A0A0G2JK05 382 aa15.68■□□□□ 0.1
GABPB1-212ENST00000615671 ATP5G3P48201 142 aa15.68■□□□□ 0.1
GABPB1-212ENST00000615671 APOMO95445 188 aa15.68■□□□□ 0.1
GABPB1-212ENST00000615671 RHOGP84095 191 aa15.68■□□□□ 0.1
GABPB1-212ENST00000615671 SIPA1L3O60292 1781 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-212ENST00000615671 H3BRM9 83 aa15.68■□□□□ 0.1
GABPB1-212ENST00000615671 PLPPR1Q8TBJ4 325 aa15.68■□□□□ 0.1
GABPB1-212ENST00000615671 TRAV14DV4A0A0A6YYC5 116 aa15.68■□□□□ 0.1
GABPB1-212ENST00000615671 EVI2AP22794 236 aa15.68■□□□□ 0.1
GABPB1-212ENST00000615671 OSR1Q8TAX0 266 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-212ENST00000615671 PLSCR2Q9NRY7 297 aa15.68■□□□□ 0.1
GABPB1-212ENST00000615671 ASXL3Q9C0F0 2248 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 SMIM6P0DI80 62 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 FOXF2Q12947 444 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 LINC00862A6NCI5 91 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 HOXA5P20719 270 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 IFITM3Q01628 133 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 PAPPA-AS1Q5QFB9 102 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 Q71RC1 249 aaPredicted RBP15.67■□□□□ 0.1
GABPB1-212ENST00000615671 PUSL1Q8N0Z8 303 aaKnown RBP15.67■□□□□ 0.1
GABPB1-212ENST00000615671 MYOFQ9NZM1 2061 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 STRCP1A6NGW2 1772 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 FAM209BQ5JX69 171 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 ASCL4Q6XD76 172 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 BRD3OSQ6XYD6 125 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 TNS1Q9HBL0 1735 aaKnown RBP15.67■□□□□ 0.1
GABPB1-212ENST00000615671 ARID1AO14497 2285 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 IGLV3-21P80748 117 aaPredicted RBP15.67■□□□□ 0.1
GABPB1-212ENST00000615671 EFNB1P98172 346 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 PMCHL1Q16048 86 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 Q5BKY6 102 aa15.67■□□□□ 0.1
GABPB1-212ENST00000615671 PDCD11Q14690 1871 aaKnown RBP15.66■□□□□ 0.1
GABPB1-212ENST00000615671 LOC390937A0A1W2PQ73 354 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 TMEM14DPA8MWL7 114 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 OR11H12B2RN74 326 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 PRR31Q5SQ13 230 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 LRTM2Q8N967 370 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 OR11H1Q8NG94 326 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 OR11H2Q8NH07 326 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 IGHV3-53P01767 116 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 IGHV4-39P01824 125 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 NPC2P61916 151 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 TMEM30BQ3MIR4 351 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 FER1L6-AS1Q8NA97 138 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 LEPP41159 167 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 PSMG4Q5JS54 123 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 ERASQ7Z444 233 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 VMO1Q7Z5L0 202 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 FAM89BQ8N5H3 189 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 LINC00312Q9Y6C7 94 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 IGHV1-18A0A0C4DH31 117 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 ZNF883P0CG24 379 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 DEPPQ9NTK1 212 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 SVILO95425 2214 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 C2orf68Q2NKX9 166 aa15.66■□□□□ 0.1
GABPB1-212ENST00000615671 SMIM13P0DJ93 91 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 C19orf24Q9BVV8 132 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 THSD7AQ9UPZ6 1657 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 RBMY1BA6NDE4 496 aaKnown RBP15.65■□□□□ 0.1
GABPB1-212ENST00000615671 RBMY1EA6NEQ0 496 aaKnown RBP15.65■□□□□ 0.1
GABPB1-212ENST00000615671 RBMY1DP0C7P1 496 aaKnown RBP15.65■□□□□ 0.1
GABPB1-212ENST00000615671 RBMY1A1P0DJD3 496 aaKnown RBP15.65■□□□□ 0.1
GABPB1-212ENST00000615671 RBMY1CP0DJD4 496 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 PSCAO43653 123 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 K7ERU9 68 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 TIMM23O14925 209 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 TYMSP04818 313 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 TMEM183AQ8IXX5 376 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 GATAD1Q8WUU5 269 aa15.65■□□□□ 0.1
GABPB1-212ENST00000615671 NXT2Q9NPJ8 142 aaKnown RBP15.65■□□□□ 0.1
GABPB1-212ENST00000615671 IQCF6A8MYZ5 107 aa15.64■□□□□ 0.09
GABPB1-212ENST00000615671 TMEM50AO95807 157 aa15.64■□□□□ 0.09
GABPB1-212ENST00000615671 SRSF6Q13247 344 aaKnown RBP15.64■□□□□ 0.09
GABPB1-212ENST00000615671 HIST1H2BAQ96A08 127 aa15.64■□□□□ 0.09
GABPB1-212ENST00000615671 MPTX1A8MV57 137 aa15.64■□□□□ 0.09
GABPB1-212ENST00000615671 C12orf54Q6X4T0 127 aa15.64■□□□□ 0.09
GABPB1-212ENST00000615671 FMC1Q96HJ9 113 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms