RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 PTPRQQ9UMZ3 2332 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 ACACBO00763 2458 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGKV1-12A0A0C4DH73 117 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGKV1D-12P01611 117 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 PRB3Q04118 309 aaPredicted RBP10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 RNFT1Q5M7Z0 435 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 PGLYRP4Q96LB8 373 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 RNF126Q9BV68 326 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 FOXD3Q9UJU5 478 aaPredicted RBP10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 H0YIZ8 118 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 TMEM250H0YL14 139 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 HLA-DQA1P01909 254 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 IL6RP08887 468 aaPredicted RBP10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 TFF3Q07654 80 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 ZNF841Q6ZN19 808 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 GGNQ86UU5 652 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 C1QL4Q86Z23 238 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 SRSF12Q8WXF0 261 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 DPM3Q9P2X0 92 aa10.51□□□□□ -0.73
TNFAIP3-206ENST00000612899 COLCA2A8K830 154 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 CRYGSP22914 178 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 PYY3Q5JQD4 70 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 GOLT1AQ6ZVE7 132 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 TRAV24A0A0B4J272 114 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGFBP2P18065 325 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 OR10J6PQ8NGY7 276 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 MYOZ3Q8TDC0 251 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 PIMREGQ9BSJ6 248 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 MRPL18Q9H0U6 180 aaKnown RBP10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 TTC32Q5I0X7 151 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 ZNF48Q96MX3 618 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 CITED1Q99966 193 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 FANCMQ8IYD8 2048 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 TRAV30A0A087WSZ9 112 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 A0A1W2PS18 150 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 SS18L1O75177 396 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 CKS2P33552 79 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 MAS1LP35410 378 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 FOXF2Q12947 444 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 WDR82Q6UXN9 313 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 SEMA5BQ9P283 1151 aa10.5□□□□□ -0.73
TNFAIP3-206ENST00000612899 CLPSP04118 112 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 CSRP1P21291 193 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 GATA2P23769 480 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 ZNF506Q5JVG8 444 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 LINC00305Q7Z4B0 112 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 C19orf24Q9BVV8 132 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 MRPL20Q9BYC9 149 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 MEGF9Q9H1U4 602 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 MUC6Q6W4X9 2439 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 TM4SF5O14894 197 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 LCN2P80188 198 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 NABP1Q96AH0 204 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 IFI27L2Q9H2X8 130 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGHV3-49A0A0A0MS15 119 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 FOXH1O75593 365 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 EBLN2Q6P2I7 272 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 NEU1Q99519 415 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 LAMTOR2Q9Y2Q5 125 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 LRRK1Q38SD2 2015 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 C5orf63A6NC05 138 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 IFITM10A6NMD0 228 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 CGAP01215 116 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 ATP5IP56385 69 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 CENPWQ5EE01 88 aa10.49□□□□□ -0.73
TNFAIP3-206ENST00000612899 GRIFINA4D1Z8 144 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 PCNX2A6NKB5 2137 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 SRIP30626 198 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 PDLIM4P50479 330 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 CYP2G1PQ6ZSU1 146 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 BIVMQ86UB2 503 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 DERL1Q9BUN8 251 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 COL25A1Q9BXS0 654 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGHV3OR16-8A0A075B7F1 116 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGKV3D-15A0A087WSY6 115 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 TDGF1P3P51864 188 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 FAM131CQ96AQ9 280 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 A1L4Q6 167 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 LYNX1G3V0Z9 82 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 NBEAP1P0C6P0 100 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 LYNX1P0DP58 116 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 ZNF525Q8N782 197 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 SFRP2Q96HF1 295 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 CHTOPQ9Y3Y2 248 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 LINC00312Q9Y6C7 94 aa10.48□□□□□ -0.73
TNFAIP3-206ENST00000612899 CACNA1AO00555 2505 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGKV3-15P01624 115 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 Q0VFX4 171 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 MRPL32Q9BYC8 188 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 A0A087WWC5 75 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGKV1D-33P01593 117 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGKV1-33P01594 117 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGHV3-23P01764 117 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 NPPCP23582 126 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 CA7P43166 264 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 RIPPLY3P57055 190 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 HERVK_113P61574 105 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms