RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 TGFAP01135 160 aa9.82□□□□□ -0.84
CBWD1-220ENST00000612045 AVPP01185 164 aa9.82□□□□□ -0.84
CBWD1-220ENST00000612045 RNASE2P10153 161 aaKnown RBP9.82□□□□□ -0.84
CBWD1-220ENST00000612045 SSBP2P81877 361 aaPredicted RBP9.82□□□□□ -0.84
CBWD1-220ENST00000612045 C5orf64Q2M2E5 130 aa9.82□□□□□ -0.84
CBWD1-220ENST00000612045 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
CBWD1-220ENST00000612045 TMEM249Q2WGJ8 235 aa9.82□□□□□ -0.84
CBWD1-220ENST00000612045 TAF15Q92804 592 aaKnown RBP eCLIP9.82□□□□□ -0.84
CBWD1-220ENST00000612045 CR1P17927 2039 aa9.81□□□□□ -0.84
CBWD1-220ENST00000612045 NAV3Q8IVL0 2385 aa9.81□□□□□ -0.84
CBWD1-220ENST00000612045 NCBP2LA6PVI3 153 aaKnown RBP9.81□□□□□ -0.84
CBWD1-220ENST00000612045 J3QLI3 93 aa9.81□□□□□ -0.84
CBWD1-220ENST00000612045 OR13C7P0DN81 318 aa9.81□□□□□ -0.84
CBWD1-220ENST00000612045 IGHV4-31P0DP07 118 aa9.81□□□□□ -0.84
CBWD1-220ENST00000612045 KLF17Q5JT82 389 aaPredicted RBP9.81□□□□□ -0.84
CBWD1-220ENST00000612045 TMEM182Q6ZP80 229 aaPredicted RBP9.81□□□□□ -0.84
CBWD1-220ENST00000612045 SAT2Q96F10 170 aaPredicted RBP9.81□□□□□ -0.84
CBWD1-220ENST00000612045 RSG1Q9BU20 258 aa9.81□□□□□ -0.84
CBWD1-220ENST00000612045 MED9Q9NWA0 146 aa9.81□□□□□ -0.84
CBWD1-220ENST00000612045 A0A0U1RQK1 487 aa9.8□□□□□ -0.84
CBWD1-220ENST00000612045 IGLC7A0M8Q6 106 aa9.8□□□□□ -0.84
CBWD1-220ENST00000612045 RAB5CP51148 216 aa9.8□□□□□ -0.84
CBWD1-220ENST00000612045 DLK1P80370 383 aa9.8□□□□□ -0.84
CBWD1-220ENST00000612045 COMMD7Q86VX2 200 aa9.8□□□□□ -0.84
CBWD1-220ENST00000612045 SRSF12Q8WXF0 261 aaKnown RBP9.8□□□□□ -0.84
CBWD1-220ENST00000612045 MEGF9Q9H1U4 602 aa9.8□□□□□ -0.84
CBWD1-220ENST00000612045 CCDC168Q8NDH2 2452 aa9.8□□□□□ -0.84
CBWD1-220ENST00000612045 HECTD1Q9ULT8 2610 aa9.8□□□□□ -0.84
CBWD1-220ENST00000612045 PRRC2AP48634 2157 aaKnown RBP9.8□□□□□ -0.84
CBWD1-220ENST00000612045 TEX22C9J3V5 150 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 UMAD1C9J7I0 102 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 CNIH1O95406 144 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 MDKP21741 143 aaPredicted RBP9.79□□□□□ -0.84
CBWD1-220ENST00000612045 FGF7P21781 194 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 MRPL41Q8IXM3 137 aaKnown RBP9.79□□□□□ -0.84
CBWD1-220ENST00000612045 P2RX4Q99571 388 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 PSMG3Q9BT73 122 aaPredicted RBP9.79□□□□□ -0.84
CBWD1-220ENST00000612045 PFDN2Q9UHV9 154 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 SMCO3A2RU48 225 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 TRIM77I1YAP6 450 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 PRH1P02810 166 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 REG1AP05451 166 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 FHITP49789 147 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 SUB1P53999 127 aaKnown RBP eCLIP9.79□□□□□ -0.84
CBWD1-220ENST00000612045 BLOC1S1P78537 153 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 ARSJQ5FYB0 599 aaPredicted RBP9.79□□□□□ -0.84
CBWD1-220ENST00000612045 PXDC1Q5TGL8 231 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 WFDC11Q8NEX6 87 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 CITED4Q96RK1 184 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 PARP11Q9NR21 331 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 C1RLQ9NZP8 487 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 FAM96BQ9Y3D0 163 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 FBXO7Q9Y3I1 522 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 TIMM9Q9Y5J7 89 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 ITPR3Q14573 2671 aa9.79□□□□□ -0.84
CBWD1-220ENST00000612045 CSPG4Q6UVK1 2322 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 ABCA1O95477 2261 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 TEX46H3BTG2 121 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 APELAP0DMC3 54 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 AREGP15514 252 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 BTNL8Q6UX41 500 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 TREML4Q6UXN2 200 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 ZNF562Q6V9R5 426 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 Q6ZRG5 221 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 HSD17B13Q7Z5P4 300 aaPredicted RBP9.78□□□□□ -0.84
CBWD1-220ENST00000612045 CENPVQ7Z7K6 275 aaPredicted RBP9.78□□□□□ -0.84
CBWD1-220ENST00000612045 ZNF114Q8NC26 417 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 SSMEM1Q8WWF3 244 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 SRSF8Q9BRL6 282 aaKnown RBP9.78□□□□□ -0.84
CBWD1-220ENST00000612045 NPCDR1Q9BY65 106 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 WDR83OSQ9Y284 106 aa9.78□□□□□ -0.84
CBWD1-220ENST00000612045 SOX21Q9Y651 276 aaPredicted RBP9.78□□□□□ -0.84
CBWD1-220ENST00000612045 TEX15Q9BXT5 2789 aa9.77□□□□□ -0.84
CBWD1-220ENST00000612045 FNDC10F2Z333 226 aa9.77□□□□□ -0.84
CBWD1-220ENST00000612045 CAMLGP49069 296 aa9.77□□□□□ -0.84
CBWD1-220ENST00000612045 SERF2P84101 59 aa9.77□□□□□ -0.84
CBWD1-220ENST00000612045 FXYD3Q14802 87 aa9.77□□□□□ -0.84
CBWD1-220ENST00000612045 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.84
CBWD1-220ENST00000612045 Q8N9W7 124 aa9.77□□□□□ -0.84
CBWD1-220ENST00000612045 PIFOQ8TCI5 191 aa9.77□□□□□ -0.84
CBWD1-220ENST00000612045 RNASEH2CQ8TDP1 164 aaKnown RBP9.77□□□□□ -0.84
CBWD1-220ENST00000612045 NPVFQ9HCQ7 196 aa9.77□□□□□ -0.84
CBWD1-220ENST00000612045 FBP1P09467 338 aa9.77□□□□□ -0.85
CBWD1-220ENST00000612045 CX3CL1P78423 397 aa9.77□□□□□ -0.85
CBWD1-220ENST00000612045 CD69Q07108 199 aa9.77□□□□□ -0.85
CBWD1-220ENST00000612045 CYB5R2Q6BCY4 276 aa9.77□□□□□ -0.85
CBWD1-220ENST00000612045 PVRIGQ6DKI7 326 aa9.77□□□□□ -0.85
CBWD1-220ENST00000612045 ZNF709Q8N972 641 aa9.77□□□□□ -0.85
CBWD1-220ENST00000612045 FAM213BQ8TBF2 198 aa9.77□□□□□ -0.85
CBWD1-220ENST00000612045 LSM4Q9Y4Z0 139 aaKnown RBP9.77□□□□□ -0.85
CBWD1-220ENST00000612045 MFSD2BA6NFX1 497 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 MPDU1O75352 247 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 GPX4P36969 197 aaPredicted RBP9.76□□□□□ -0.85
CBWD1-220ENST00000612045 BPIFB3P59826 476 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 ZNF616Q08AN1 781 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 C19orf35Q6ZS72 473 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 OR1P1Q8NH06 330 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 LYPD6BQ8NI32 183 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 ABHD5Q8WTS1 349 aa9.76□□□□□ -0.85
CBWD1-220ENST00000612045 CACNG8Q8WXS5 425 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms