RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 TMEM50AO95807 157 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 ZNF383Q8NA42 475 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 MBNL3Q9NUK0 354 aaKnown RBP10.89□□□□□ -0.67
TCF3-220ENST00000611869 RNF24Q9Y225 148 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 S4R3C0 116 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 ZNF137PP52743 207 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 VAMP8Q9BV40 100 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 ADCYAP1P18509 176 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 LINC00518Q8N0U6 118 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 SSC4DQ8WTU2 575 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 VKORC1Q9BQB6 163 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 OR51M1Q9H341 326 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 ARL2-SNX15V9GYD0 113 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 SCO2A0A1W2PP80 73 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 FOXI3A8MTJ6 420 aaPredicted RBP10.88□□□□□ -0.67
TCF3-220ENST00000611869 C1QTNF9BB2RNN3 333 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 HIST1H1EP10412 219 aaKnown RBP10.88□□□□□ -0.67
TCF3-220ENST00000611869 SRP14P37108 136 aaKnown RBP10.88□□□□□ -0.67
TCF3-220ENST00000611869 PRR30Q53SZ7 412 aaPredicted RBP10.88□□□□□ -0.67
TCF3-220ENST00000611869 MIR17HGQ75NE6 70 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 RPP25LQ8N5L8 163 aaKnown RBP10.88□□□□□ -0.67
TCF3-220ENST00000611869 ZCCHC14Q8WYQ9 949 aaKnown RBP10.88□□□□□ -0.67
TCF3-220ENST00000611869 SDF2L1Q9HCN8 221 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 C5orf42Q9H799 3197 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 DPRXA6NFQ7 191 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 MST1LQ2TV78 715 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 PIP4P1Q86T03 277 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 EAF1Q96JC9 268 aaPredicted RBP10.88□□□□□ -0.67
TCF3-220ENST00000611869 WDR83OSQ9Y284 106 aa10.88□□□□□ -0.67
TCF3-220ENST00000611869 S100A4P26447 101 aaKnown RBP10.87□□□□□ -0.67
TCF3-220ENST00000611869 PPOXP50336 477 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 LY6DQ14210 128 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 C10orf55Q5SWW7 151 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 FGF23Q9GZV9 251 aaPredicted RBP10.87□□□□□ -0.67
TCF3-220ENST00000611869 AUP1Q9Y679 476 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 C10orf142B7Z368 130 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 MYOD1P15172 320 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 CD24P25063 80 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 FA2HQ7L5A8 372 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 CLEC5AQ9NY25 188 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 BRCA2P51587 3418 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 TRBV23-1A0A0A0MS06 115 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 C9JQL5 133 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 CDKN1AP38936 164 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 FAM162BQ5T6X4 162 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 TMEM14EPQ6UXP3 125 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 OR10W1Q8NGF6 305 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 EML6Q6ZMW3 1958 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 NPIPB11E5RHQ5 1161 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 FCGR2BP31994 310 aaPredicted RBP10.87□□□□□ -0.67
TCF3-220ENST00000611869 CENPWQ5EE01 88 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 SFRP2Q96HF1 295 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 DCAF16Q9NXF7 216 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 DPM3Q9P2X0 92 aa10.87□□□□□ -0.67
TCF3-220ENST00000611869 IGHV3OR16-10A0A075B7F0 116 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 RPL29P47914 159 aaKnown RBP10.86□□□□□ -0.67
TCF3-220ENST00000611869 KIAA1644Q3SXP7 199 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 LINC00305Q7Z4B0 112 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 OR4A5Q8NH83 315 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 ATP5IP56385 69 aaPredicted RBP10.86□□□□□ -0.67
TCF3-220ENST00000611869 SSBP3Q9BWW4 388 aaPredicted RBP10.86□□□□□ -0.67
TCF3-220ENST00000611869 SPRY4Q9C004 299 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 PGPEP1LA6NFU8 196 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 FAM106CPP0CH98 169 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 ERVK11-1P61568 191 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 UNQ5815/PRO19632Q6UWF5 114 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 TMEM144Q7Z5S9 345 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 NEUROG1Q92886 237 aa10.86□□□□□ -0.67
TCF3-220ENST00000611869 IGF2RP11717 2491 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 TRAV34A0A0B4J273 112 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 J3KRW8 73 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 SLC17A3O00476 420 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 RPL23P62829 140 aaKnown RBP10.85□□□□□ -0.67
TCF3-220ENST00000611869 ADIPOQQ15848 244 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 PRSS3P2Q8NHM4 247 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 MBD3L1Q8WWY6 194 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 GOSR1O95249 250 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 LCN2P80188 198 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 COX19Q49B96 90 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 TREML4Q6UXN2 200 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 BPIFA4PQ86YQ2 179 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 TMEM133Q9H2Q1 129 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 NAGKQ9UJ70 344 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 IGKV1D-33P01593 117 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 IGKV1-33P01594 117 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 ZNRD1Q9P1U0 126 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 PTPRQQ9UMZ3 2332 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 CCKARP32238 428 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 TMEM200BQ69YZ2 307 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 CLEC2AQ6UVW9 174 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 OR1P1Q8NH06 330 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 C19orf24Q9BVV8 132 aa10.85□□□□□ -0.67
TCF3-220ENST00000611869 GRIFINA4D1Z8 144 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 VENTXO95231 258 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 APCSP02743 223 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 ORM1P02763 201 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 CDX1P47902 265 aaPredicted RBP10.84□□□□□ -0.67
TCF3-220ENST00000611869 HEPN1Q6WQI6 88 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 ZNF788Q6ZQV5 615 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms