RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 ATOH7Q8N100 152 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 LINC00469Q8N7U9 141 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 CLEC5AQ9NY25 188 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 PEAR1Q5VY43 1037 aaPredicted RBP10.37□□□□□ -0.75
CDH1-212ENST00000611625 TMEM116Q8NCL8 245 aa10.37□□□□□ -0.75
CDH1-212ENST00000611625 DIDO1Q9BTC0 2240 aaKnown RBP10.37□□□□□ -0.75
CDH1-212ENST00000611625 NDUFAF3Q9BU61 184 aa10.37□□□□□ -0.75
CDH1-212ENST00000611625 LIME1Q9H400 295 aa10.37□□□□□ -0.75
CDH1-212ENST00000611625 TBL2Q9Y4P3 447 aaKnown RBP10.37□□□□□ -0.75
CDH1-212ENST00000611625 HEATR1Q9H583 2144 aaKnown RBP10.37□□□□□ -0.75
CDH1-212ENST00000611625 TMEM189A5PLL7 270 aa10.37□□□□□ -0.75
CDH1-212ENST00000611625 F2RL2O00254 374 aa10.37□□□□□ -0.75
CDH1-212ENST00000611625 FOXF2Q12947 444 aa10.37□□□□□ -0.75
CDH1-212ENST00000611625 LOC389332A0A1B0GUA5 103 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 SIAH2O43255 324 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 CD40P25942 277 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 Q6ZRM9 215 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 CACNG8Q8WXS5 425 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 COL4A4P53420 1690 aaPredicted RBP10.36□□□□□ -0.75
CDH1-212ENST00000611625 TAS2R60P59551 318 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 ECSCRQ19T08 205 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 KHDC1LQ5JSQ8 128 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 SRSF12Q8WXF0 261 aaKnown RBP10.36□□□□□ -0.75
CDH1-212ENST00000611625 HS3ST6Q96QI5 342 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 MRPL20Q9BYC9 149 aaKnown RBP10.36□□□□□ -0.75
CDH1-212ENST00000611625 DPRXA6NFQ7 191 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 SERF1AO75920 110 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 Q6P435 159 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 OR4A5Q8NH83 315 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 PEX7O00628 323 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 NBEAP1P0C6P0 100 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 PYY3Q5JQD4 70 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 C20orf204Q6ZNR8 217 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 GOLT1AQ6ZVE7 132 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 OCC1Q8TAD7 63 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 PKDREJQ9NTG1 2253 aa10.36□□□□□ -0.75
CDH1-212ENST00000611625 SHANK1Q9Y566 2161 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 A6NDN8 102 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 UPK2O00526 184 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 AMBPP02760 352 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 CTAG1AP78358 180 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 PPIAL4CA0A0B4J2A2 164 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 IGKV1-6A0A0C4DH72 117 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 PPIAL4GP0DN37 164 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 FCGR2BP31994 310 aaPredicted RBP10.35□□□□□ -0.75
CDH1-212ENST00000611625 HBBP68871 147 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 C10orf91Q5T1B1 145 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 TREML4Q6UXN2 200 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 ZNF788Q6ZQV5 615 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 EAF1Q96JC9 268 aaPredicted RBP10.35□□□□□ -0.75
CDH1-212ENST00000611625 CLEC7AQ9BXN2 247 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 COL4A3Q01955 1670 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 FAM90A9PA6NNJ1 464 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 CCL21O00585 134 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 SAA1P0DJI8 122 aaPredicted RBP10.35□□□□□ -0.75
CDH1-212ENST00000611625 ADMP35318 185 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 FOXA3P55318 350 aaPredicted RBP10.35□□□□□ -0.75
CDH1-212ENST00000611625 EFNB3Q15768 340 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 RSPO1Q2MKA7 263 aaPredicted RBP10.35□□□□□ -0.75
CDH1-212ENST00000611625 TEX38Q6PEX7 206 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 TBR1Q16650 682 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 ZNF600Q6ZNG1 722 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 COLCA1Q6ZS62 124 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 GGTLC1Q9BX51 225 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 LINC00312Q9Y6C7 94 aa10.35□□□□□ -0.75
CDH1-212ENST00000611625 M0QZ24 198 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 RNF224P0DH78 156 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 FAM90A2PQ658T7 463 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 RNASE7Q9H1E1 156 aaKnown RBP10.34□□□□□ -0.75
CDH1-212ENST00000611625 TMEM106BQ9NUM4 274 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 ZFP30Q9Y2G7 519 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 NUP210Q8TEM1 1887 aaPredicted RBP10.34□□□□□ -0.75
CDH1-212ENST00000611625 IGHV1-69-2A0A0G2JMI3 117 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 NPIPB11E5RHQ5 1161 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 NEU1Q99519 415 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 KIAA1671Q9BY89 1806 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 IGHV1-18A0A0C4DH31 117 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 SRRM5B3KS81 715 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 F5H697 171 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 STAG3L2P0CL84 134 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 STAG3L3P0CL85 134 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 GPR6P46095 362 aaPredicted RBP10.34□□□□□ -0.75
CDH1-212ENST00000611625 MEF2CQ06413 473 aaPredicted RBP10.34□□□□□ -0.75
CDH1-212ENST00000611625 ZNF106Q9H2Y7 1883 aaKnown RBP10.34□□□□□ -0.75
CDH1-212ENST00000611625 SLC25A34Q6PIV7 304 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 OR52E5Q8NH55 327 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 ATG101Q9BSB4 218 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 WNT10AQ9GZT5 417 aa10.34□□□□□ -0.75
CDH1-212ENST00000611625 TMEM50AO95807 157 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 C12orf54Q6X4T0 127 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 PROK2Q9HC23 129 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 RALYQ9UKM9 306 aaKnown RBP10.33□□□□□ -0.76
CDH1-212ENST00000611625 NBASA2RRP1 2371 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 CCL3L1P16619 93 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 MFAP4P55083 255 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 IL15RAQ13261 267 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 TWIST1Q15672 202 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 LINC01551Q86U37 167 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 PRR7Q8TB68 274 aa10.33□□□□□ -0.76
CDH1-212ENST00000611625 RNASEH2CQ8TDP1 164 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms