RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 FAM90A2PQ658T7 463 aa12.29□□□□□ -0.44
CCDC12-210ENST00000604181 GBGT1Q8N5D6 347 aa12.29□□□□□ -0.44
CCDC12-210ENST00000604181 APLNQ9ULZ1 77 aa12.29□□□□□ -0.44
CCDC12-210ENST00000604181 RRP15Q9Y3B9 282 aaKnown RBP12.29□□□□□ -0.44
CCDC12-210ENST00000604181 MARCH11A6NNE9 402 aa12.28□□□□□ -0.44
CCDC12-210ENST00000604181 GNRHRP30968 328 aa12.28□□□□□ -0.44
CCDC12-210ENST00000604181 SFXN4Q6P4A7 337 aa12.28□□□□□ -0.44
CCDC12-210ENST00000604181 LILRB2Q8N423 598 aa12.28□□□□□ -0.44
CCDC12-210ENST00000604181 C2CD4CQ8TF44 421 aa12.28□□□□□ -0.44
CCDC12-210ENST00000604181 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
CCDC12-210ENST00000604181 COMMD9Q9P000 198 aa12.28□□□□□ -0.44
CCDC12-210ENST00000604181 MUC4Q99102 2169 aa12.28□□□□□ -0.44
CCDC12-210ENST00000604181 MEIS3P1A6NDR6 274 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 SCGNO76038 276 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 CA1P00915 261 aaPredicted RBP12.27□□□□□ -0.45
CCDC12-210ENST00000604181 IGHV3-48P01763 117 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 IFNA4P05014 189 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 FGF9P31371 208 aaPredicted RBP12.27□□□□□ -0.45
CCDC12-210ENST00000604181 THOC7Q6I9Y2 204 aaKnown RBP12.27□□□□□ -0.45
CCDC12-210ENST00000604181 FAM24BQ8N5W8 94 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 TMEM116Q8NCL8 245 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 LSM10Q969L4 123 aaKnown RBP12.27□□□□□ -0.45
CCDC12-210ENST00000604181 OR10C1Q96KK4 312 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 CNBD2Q96M20 576 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 C6orf62Q9GZU0 229 aaPredicted RBP12.27□□□□□ -0.45
CCDC12-210ENST00000604181 MFFQ9GZY8 342 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 RNF167Q9H6Y7 350 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 ABCA13Q86UQ4 5058 aa12.27□□□□□ -0.45
CCDC12-210ENST00000604181 IGLL5B9A064 214 aa12.26□□□□□ -0.45
CCDC12-210ENST00000604181 NUPL2O15504 423 aaKnown RBP12.26□□□□□ -0.45
CCDC12-210ENST00000604181 RLN1P04808 185 aa12.26□□□□□ -0.45
CCDC12-210ENST00000604181 G6PCP35575 357 aa12.26□□□□□ -0.45
CCDC12-210ENST00000604181 HSD17B13Q7Z5P4 300 aaPredicted RBP12.26□□□□□ -0.45
CCDC12-210ENST00000604181 GIMAP1Q8WWP7 306 aa12.26□□□□□ -0.45
CCDC12-210ENST00000604181 FCAMRQ8WWV6 532 aa12.26□□□□□ -0.45
CCDC12-210ENST00000604181 AUNIPQ9H7T9 357 aa12.26□□□□□ -0.45
CCDC12-210ENST00000604181 OR51B2Q9Y5P1 312 aa12.26□□□□□ -0.45
CCDC12-210ENST00000604181 I3L2K1 104 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 CYB5BO43169 146 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 YIF1AO95070 293 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 KRASP01116 189 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 APOHP02749 345 aaPredicted RBP12.25□□□□□ -0.45
CCDC12-210ENST00000604181 GIG44P09565 113 aaPredicted RBP12.25□□□□□ -0.45
CCDC12-210ENST00000604181 SDC2P34741 201 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 LPAR6P43657 344 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 MXD1Q05195 221 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 LEMD1Q68G75 181 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 Q8NAQ8 132 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 OR5AP2Q8NGF4 316 aa12.25□□□□□ -0.45
CCDC12-210ENST00000604181 A0A1B0GVY2 172 aa12.24□□□□□ -0.45
CCDC12-210ENST00000604181 PGLYRP1O75594 196 aaPredicted RBP12.24□□□□□ -0.45
CCDC12-210ENST00000604181 RBMY1A1P0DJD3 496 aaKnown RBP12.24□□□□□ -0.45
CCDC12-210ENST00000604181 RBMY1CP0DJD4 496 aa12.24□□□□□ -0.45
CCDC12-210ENST00000604181 F2RP25116 425 aa12.24□□□□□ -0.45
CCDC12-210ENST00000604181 ERVK-16P61578 105 aa12.24□□□□□ -0.45
CCDC12-210ENST00000604181 RBMY1FQ15415 496 aaKnown RBP12.24□□□□□ -0.45
CCDC12-210ENST00000604181 UBE2UQ5VVX9 321 aa12.24□□□□□ -0.45
CCDC12-210ENST00000604181 TCF24Q7RTU0 167 aa12.24□□□□□ -0.45
CCDC12-210ENST00000604181 TPRA1Q86W33 373 aa12.24□□□□□ -0.45
CCDC12-210ENST00000604181 ST8SIA2Q92186 375 aa12.24□□□□□ -0.45
CCDC12-210ENST00000604181 XRCC3O43542 346 aa12.23□□□□□ -0.45
CCDC12-210ENST00000604181 PSMB9P28065 219 aa12.23□□□□□ -0.45
CCDC12-210ENST00000604181 RFX2P48378 723 aa12.23□□□□□ -0.45
CCDC12-210ENST00000604181 DEFB131AP59861 70 aa12.23□□□□□ -0.45
CCDC12-210ENST00000604181 TMEM187Q14656 261 aa12.23□□□□□ -0.45
CCDC12-210ENST00000604181 OR1P1Q8NH06 330 aa12.23□□□□□ -0.45
CCDC12-210ENST00000604181 SLC25A46Q96AG3 418 aa12.23□□□□□ -0.45
CCDC12-210ENST00000604181 DGCR14Q96DF8 476 aaKnown RBP12.23□□□□□ -0.45
CCDC12-210ENST00000604181 MISP3Q96FF7 219 aa12.23□□□□□ -0.45
CCDC12-210ENST00000604181 NXF2Q9GZY0 626 aaKnown RBP12.23□□□□□ -0.45
CCDC12-210ENST00000604181 TMEM14BQ9NUH8 114 aa12.23□□□□□ -0.45
CCDC12-210ENST00000604181 TRAV14DV4A0A0A6YYC5 116 aa12.22□□□□□ -0.45
CCDC12-210ENST00000604181 IGHV3-66A0A0C4DH42 116 aa12.22□□□□□ -0.45
CCDC12-210ENST00000604181 HERV-K104P61576 105 aa12.22□□□□□ -0.45
CCDC12-210ENST00000604181 RELQ04864 619 aaPredicted RBP12.22□□□□□ -0.45
CCDC12-210ENST00000604181 IZUMO2Q6UXV1 221 aa12.22□□□□□ -0.45
CCDC12-210ENST00000604181 FXYD6Q9H0Q3 95 aa12.22□□□□□ -0.45
CCDC12-210ENST00000604181 MS4A6AQ9H2W1 248 aa12.22□□□□□ -0.45
CCDC12-210ENST00000604181 EHFQ9NZC4 300 aa12.22□□□□□ -0.45
CCDC12-210ENST00000604181 BLOC1S6Q9UL45 172 aa12.22□□□□□ -0.45
CCDC12-210ENST00000604181 IGHV4-28A0A0C4DH34 117 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 C15orf61A6NNL5 157 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 MRPS14O60783 128 aaKnown RBP12.21□□□□□ -0.45
CCDC12-210ENST00000604181 MT-CO2P00403 227 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 MFAP4P55083 255 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 CMC4P56277 68 aaPredicted RBP12.21□□□□□ -0.45
CCDC12-210ENST00000604181 TCTAP57738 103 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 IDNKQ5T6J7 187 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 DHRS11Q6UWP2 260 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 TOMM20LQ6UXN7 152 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 Q6ZTC4 211 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 SPARTQ8N0X7 666 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 CADM3Q8N126 398 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 MOB3AQ96BX8 217 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 ZNF2Q9BSG1 426 aaPredicted RBP12.21□□□□□ -0.45
CCDC12-210ENST00000604181 VSIRQ9H7M9 311 aa12.21□□□□□ -0.45
CCDC12-210ENST00000604181 HSPG2P98160 4391 aa12.21□□□□□ -0.46
CCDC12-210ENST00000604181 SNAPC5O75971 98 aa12.2□□□□□ -0.46
CCDC12-210ENST00000604181 DFFBO76075 338 aa12.2□□□□□ -0.46
CCDC12-210ENST00000604181 HLA-DMBP28068 263 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms