RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 GTSCR1Q86UQ5 136 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 OR51S1Q8NGJ8 323 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 OR1P1Q8NH06 330 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 ZNF502Q8TBZ5 544 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 DYNLRB2Q8TF09 96 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 CCDC140Q96MF4 163 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 TP53RKQ96S44 253 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 SOSTQ9BQB4 213 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 THAP7Q9BT49 309 aaPredicted RBP8.81□□□□□ -1
CCDC12-209ENST00000604164 PLEKHA3Q9HB20 300 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 MCUBQ9NWR8 336 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 TECRQ9NZ01 308 aaKnown RBP8.81□□□□□ -1
CCDC12-209ENST00000604164 KCNIP3Q9Y2W7 256 aa8.81□□□□□ -1
CCDC12-209ENST00000604164 OR2C1O95371 312 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 IGKV1-39P01597 117 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 IGHV3-23P01764 117 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 IGKV1D-39P04432 117 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 SPANXN2Q5MJ10 180 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 FAAP20Q6NZ36 180 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 C19orf35Q6ZS72 473 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 SGPP2Q8IWX5 399 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 SLC35G3Q8N808 338 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 ZNF114Q8NC26 417 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 BSCL2Q96G97 398 aaPredicted RBP8.8□□□□□ -1
CCDC12-209ENST00000604164 TMEM222Q9H0R3 208 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 NAA60Q9H7X0 242 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 ENY2Q9NPA8 101 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 NDUFA13Q9P0J0 144 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 GPR132Q9UNW8 380 aa8.8□□□□□ -1
CCDC12-209ENST00000604164 ZNF320A2RRD8 509 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 MFSD2BA6NFX1 497 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 A8MWP6 167 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 IFNA17P01571 189 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 GPR183P32249 361 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 SNCAP37840 140 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 SUB1P53999 127 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC12-209ENST00000604164 SP6Q3SY56 376 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 TOMM5Q8N4H5 51 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 OR2C3Q8N628 320 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 RBPMSQ93062 196 aaKnown RBP8.79□□□□□ -1
CCDC12-209ENST00000604164 MARC2Q969Z3 335 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 TXN2Q99757 166 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 RTBDNQ9BSG5 229 aaPredicted RBP8.79□□□□□ -1
CCDC12-209ENST00000604164 RBM38Q9H0Z9 239 aaKnown RBP8.79□□□□□ -1
CCDC12-209ENST00000604164 C21orf62Q9NYP8 219 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 UFC1Q9Y3C8 167 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 DMRT1Q9Y5R6 373 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 S4R3C0 116 aa8.79□□□□□ -1
CCDC12-209ENST00000604164 PRKDCP78527 4128 aaKnown RBP8.78□□□□□ -1
CCDC12-209ENST00000604164 CRYM-AS1A6NIL9 109 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 C2orf70A6NJV1 201 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 INS-IGF2F8WCM5 200 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 CORTO00230 105 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 TGOLN2O43493 480 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 CDS2O95674 445 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 IGKV1-5P01602 117 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 HLA-AP01891 365 aaKnown RBP8.78□□□□□ -1
CCDC12-209ENST00000604164 OR5AC1P0C628 307 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 ANXA3P12429 323 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 FOLR2P14207 255 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 ELLP55199 621 aaPredicted RBP8.78□□□□□ -1
CCDC12-209ENST00000604164 SRPXP78539 464 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 IL22RA2Q969J5 263 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 MISP3Q96FF7 219 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 C5orf66Q9H5L9 145 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.78□□□□□ -1
CCDC12-209ENST00000604164 SORL1Q92673 2214 aa8.78□□□□□ -1
CCDC12-209ENST00000604164 TGP01266 2768 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 A0A0B4J293 547 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 OR2T8A6NH00 312 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 DBX1A6NMT0 343 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 A8MZ25 164 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 NUPL2O15504 423 aaKnown RBP8.77□□□□□ -1.01
CCDC12-209ENST00000604164 ST8SIA3O43173 380 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 SCGB2A1O75556 95 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 P0C879 139 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 CBLN1P23435 193 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 ETV6P41212 452 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 INPP1P49441 399 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 HOXA1P49639 335 aaPredicted RBP8.77□□□□□ -1.01
CCDC12-209ENST00000604164 MFAP4P55083 255 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 RELQ04864 619 aaPredicted RBP8.77□□□□□ -1.01
CCDC12-209ENST00000604164 DEFB114Q30KQ6 69 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 Q56UQ5 140 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 CCDC190Q86UF4 302 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 HAPLN4Q86UW8 402 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 SCARB1Q8WTV0 552 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 GLYATL2Q8WU03 294 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 GALNT14Q96FL9 552 aa8.77□□□□□ -1.01
CCDC12-209ENST00000604164 K7EIM0 57 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 NDUFA4O00483 81 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 FCGR2BP31994 310 aaPredicted RBP8.76□□□□□ -1.01
CCDC12-209ENST00000604164 SPCS3P61009 180 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 KLF9Q13886 244 aaPredicted RBP8.76□□□□□ -1.01
CCDC12-209ENST00000604164 ANKRD55Q3KP44 614 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 CD300EQ496F6 205 aaPredicted RBP8.76□□□□□ -1.01
CCDC12-209ENST00000604164 TMEM268Q5VZI3 342 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 ZNF57Q68EA5 555 aaPredicted RBP8.76□□□□□ -1.01
CCDC12-209ENST00000604164 UBAC2Q8NBM4 344 aa8.76□□□□□ -1.01
CCDC12-209ENST00000604164 OR52E5Q8NH55 327 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms