RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SPATA25Q9BR10 227 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 MED28Q9H204 178 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 TMEM14BQ9NUH8 114 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 SORL1Q92673 2214 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 HMX3A6NHT5 357 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 C15orf61A6NNL5 157 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 CCSO14618 274 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 GP9P14770 177 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 CXCL3P19876 107 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 RPL8P62917 257 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 SMCO1Q147U7 214 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 ZNF562Q6V9R5 426 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 COMMD1Q8N668 190 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 OR11H7Q8NGC8 314 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 OR4D5Q8NGN0 318 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 RNASE11Q8TAA1 199 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 C2orf50Q96LR7 162 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 SPIN2AQ99865 258 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 RASL11BQ9BPW5 248 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 SPIN2BQ9BPZ2 258 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 CACNG5Q9UF02 275 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 PRNDQ9UKY0 176 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 FOXA2Q9Y261 457 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 NSG2Q9Y328 171 aa10.71□□□□□ -0.69
SHKBP1-218ENST00000598907 IGHV7-81A0A0B4J1V7 117 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 GOSR2O14653 212 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 SNAPC5O75971 98 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 SIX6O95475 246 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 CA2P00918 260 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 H2BFSP57053 126 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 GSG1LQ6UXU4 331 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 ZBTB8BQ8NAP8 495 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 OR52E5Q8NH55 327 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 OR4A16Q8NH70 328 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 CLCC1Q96S66 551 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 FKBP11Q9NYL4 201 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 MGAT4CQ9UBM8 478 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 ZNF257Q9Y2Q1 563 aa10.7□□□□□ -0.7
SHKBP1-218ENST00000598907 TEX50A0A1B0GTY4 177 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 C13orf42A0A1B0GVH6 325 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 CGB1A6NKQ9 187 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 E7EUB6 86 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 SAP30O75446 220 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 IGHG2P01859 326 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 TRAPPC2P0DI81 140 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 TRAPPC2BP0DI82 140 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 IGHV4-30-4P0DP06 118 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 MYOD1P15172 320 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 INSL3P51460 131 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 CX3CL1P78423 397 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 ID3Q02535 119 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 PLGLAQ15195 96 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 IAH1Q2TAA2 248 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 CXorf66Q5JRM2 361 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 SLC35E3Q7Z769 313 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 STPG2Q8N412 459 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 HSPB9Q9BQS6 159 aa10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 QTRT1Q9BXR0 403 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-218ENST00000598907 A0A1B0GW64 132 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 C5orf51A6NDU8 294 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 FAM90A26D6RGX4 464 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 ST8SIA3O43173 380 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 EGR2P11161 476 aaPredicted RBP10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 BCAP31P51572 246 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 CRIP2P52943 208 aaPredicted RBP10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 OR2B8PP59922 312 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 HSPE1P61604 102 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 FHL3Q13643 280 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 TNXAQ16473 311 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 THOC7Q6I9Y2 204 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 TEX38Q6PEX7 206 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 OR11H1Q8NG94 326 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 OR5B3Q8NH48 314 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 OR1S1Q8NH92 325 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 IL17DQ8TAD2 202 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 WDR89Q96FK6 387 aaPredicted RBP10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 NMES1Q9C002 83 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 RETNQ9HD89 108 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 NDUFA4L2Q9NRX3 87 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 HSPB7Q9UBY9 170 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 CACFD1Q9UGQ2 172 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 OR51B2Q9Y5P1 312 aa10.68□□□□□ -0.7
SHKBP1-218ENST00000598907 hCG_2014768A0A024R1R8 64 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 LINC01548A6NM66 108 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 FAM25EA8MYX2 175 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 SPCS3P61009 180 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 CYCSP99999 105 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 NDPQ00604 133 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 FXYD3Q14802 87 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 C10orf55Q5SWW7 151 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 OR1L8Q8NGR8 309 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 SRSF12Q8WXF0 261 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 ASB13Q8WXK3 278 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 FYTTD1Q96QD9 318 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 FAM110AQ9BQ89 295 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 ZNF436Q9C0F3 470 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 COMMD5Q9GZQ3 224 aa10.67□□□□□ -0.7
SHKBP1-218ENST00000598907 ZNF580Q9UK33 172 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms