RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 SULT1A4P0DMN0 295 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 DEFA1P59665 94 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 DEFA3P59666 94 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 C4orf46Q504U0 113 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 OR2C3Q8N628 320 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 PDCD10Q9BUL8 212 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 TMED3Q9Y3Q3 217 aa15.73■□□□□ 0.11
PNKP-211ENST00000598020 TRAV6A0A075B6T7 132 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 A0A1B0GU03 582 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 IFNA17P01571 189 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 IGHV3-11P01762 117 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 H2AFB2P0C5Z0 115 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 SLC25A6P12236 298 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 DEFA4P12838 97 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 SPCS3P61009 180 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 SMCO1Q147U7 214 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 ZNF343Q6P1L6 599 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 C19orf35Q6ZS72 473 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 ZNF114Q8NC26 417 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 OR11H1Q8NG94 326 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 OR1L6Q8NGR2 347 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 COQ8AQ8NI60 647 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 ENKURQ8TC29 256 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 OR5B12Q96R08 314 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 PLEKHA3Q9HB20 300 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 DMRT1Q9Y5R6 373 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 F11RQ9Y624 299 aaKnown RBP15.72■□□□□ 0.11
PNKP-211ENST00000598020 NOTCH3Q9UM47 2321 aa15.72■□□□□ 0.11
PNKP-211ENST00000598020 CYB5BO43169 146 aa15.71■□□□□ 0.11
PNKP-211ENST00000598020 ATP5G2Q06055 141 aa15.71■□□□□ 0.11
PNKP-211ENST00000598020 DEFB136Q30KP8 78 aa15.71■□□□□ 0.11
PNKP-211ENST00000598020 LINC00482Q8N8I6 264 aa15.71■□□□□ 0.11
PNKP-211ENST00000598020 OR1N2Q8NGR9 330 aa15.71■□□□□ 0.11
PNKP-211ENST00000598020 MITD1Q8WV92 249 aa15.71■□□□□ 0.11
PNKP-211ENST00000598020 FBXL7Q9UJT9 491 aa15.71■□□□□ 0.11
PNKP-211ENST00000598020 OR2J3O76001 311 aa15.7■□□□□ 0.1
PNKP-211ENST00000598020 HSPB1P04792 205 aaKnown RBP15.7■□□□□ 0.1
PNKP-211ENST00000598020 ERHP84090 104 aaKnown RBP15.7■□□□□ 0.1
PNKP-211ENST00000598020 ZNF616Q08AN1 781 aa15.7■□□□□ 0.1
PNKP-211ENST00000598020 C15orf32Q32M92 178 aa15.7■□□□□ 0.1
PNKP-211ENST00000598020 FAM209BQ5JX69 171 aa15.7■□□□□ 0.1
PNKP-211ENST00000598020 NRARPQ7Z6K4 114 aa15.7■□□□□ 0.1
PNKP-211ENST00000598020 OR1P1Q8NH06 330 aa15.7■□□□□ 0.1
PNKP-211ENST00000598020 THYN1Q9P016 225 aa15.7■□□□□ 0.1
PNKP-211ENST00000598020 PITX3O75364 302 aa15.69■□□□□ 0.1
PNKP-211ENST00000598020 NDUFB8O95169 186 aa15.69■□□□□ 0.1
PNKP-211ENST00000598020 DEFA5Q01523 94 aa15.69■□□□□ 0.1
PNKP-211ENST00000598020 DUX3Q96PT4 197 aa15.69■□□□□ 0.1
PNKP-211ENST00000598020 RANGRFQ9HD47 186 aaPredicted RBP15.69■□□□□ 0.1
PNKP-211ENST00000598020 LINC01619G3V211 115 aa15.68■□□□□ 0.1
PNKP-211ENST00000598020 OR8U8P0C7N1 319 aa15.68■□□□□ 0.1
PNKP-211ENST00000598020 MFAP2P55001 183 aa15.68■□□□□ 0.1
PNKP-211ENST00000598020 GGNBP1Q5YKI7 109 aa15.68■□□□□ 0.1
PNKP-211ENST00000598020 DPF1Q92782 380 aa15.68■□□□□ 0.1
PNKP-211ENST00000598020 HSPB7Q9UBY9 170 aa15.68■□□□□ 0.1
PNKP-211ENST00000598020 IGHV4OR15-8A0A075B7B6 117 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 A0A087WW49 117 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.67■□□□□ 0.1
PNKP-211ENST00000598020 IL5P05113 134 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 HOXB5P09067 269 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 EXOSC2Q13868 293 aaKnown RBP15.67■□□□□ 0.1
PNKP-211ENST00000598020 SPINK9Q5DT21 86 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 PVRIGQ6DKI7 326 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 SLC25A24Q6NUK1 477 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 OR52B4Q8NGK2 314 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 VN1R17PQ8TDU5 208 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 ZNF431Q8TF32 576 aaPredicted RBP15.67■□□□□ 0.1
PNKP-211ENST00000598020 CXorf58Q96LI9 332 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 PALMDQ9NP74 551 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 ENY2Q9NPA8 101 aa15.67■□□□□ 0.1
PNKP-211ENST00000598020 PEF1Q9UBV8 284 aaKnown RBP15.67■□□□□ 0.1
PNKP-211ENST00000598020 CD33P20138 364 aa15.66■□□□□ 0.1
PNKP-211ENST00000598020 HOXA1P49639 335 aaPredicted RBP15.66■□□□□ 0.1
PNKP-211ENST00000598020 TNFRSF9Q07011 255 aa15.66■□□□□ 0.1
PNKP-211ENST00000598020 BSXQ3C1V8 233 aa15.66■□□□□ 0.1
PNKP-211ENST00000598020 OR1S1Q8NH92 325 aa15.66■□□□□ 0.1
PNKP-211ENST00000598020 MARVELD1Q9BSK0 173 aa15.66■□□□□ 0.1
PNKP-211ENST00000598020 TRBV7-1A0A0A6YYK4 115 aa15.65■□□□□ 0.1
PNKP-211ENST00000598020 FAM90A26D6RGX4 464 aa15.65■□□□□ 0.1
PNKP-211ENST00000598020 ADAP1O75689 374 aa15.65■□□□□ 0.1
PNKP-211ENST00000598020 IFNA21P01568 189 aa15.65■□□□□ 0.1
PNKP-211ENST00000598020 SNCAP37840 140 aa15.65■□□□□ 0.1
PNKP-211ENST00000598020 SUB1P53999 127 aaKnown RBP eCLIP15.65■□□□□ 0.1
PNKP-211ENST00000598020 PLET1Q6UQ28 207 aa15.65■□□□□ 0.1
PNKP-211ENST00000598020 EEF1AKMT3Q96AZ1 226 aa15.65■□□□□ 0.1
PNKP-211ENST00000598020 ATP6V0BQ99437 205 aa15.65■□□□□ 0.1
PNKP-211ENST00000598020 SEC22CQ9BRL7 303 aa15.65■□□□□ 0.1
PNKP-211ENST00000598020 CEBPZOSA8MTT3 80 aa15.64■□□□□ 0.09
PNKP-211ENST00000598020 RNASE2P10153 161 aaKnown RBP15.64■□□□□ 0.09
PNKP-211ENST00000598020 ZP3P21754 424 aa15.64■□□□□ 0.09
PNKP-211ENST00000598020 ZNF502Q8TBZ5 544 aa15.64■□□□□ 0.09
PNKP-211ENST00000598020 RCC1LQ96I51 464 aaKnown RBP15.64■□□□□ 0.09
PNKP-211ENST00000598020 CCDC140Q96MF4 163 aa15.64■□□□□ 0.09
PNKP-211ENST00000598020 ANKRD34BA5PLL1 514 aa15.63■□□□□ 0.09
PNKP-211ENST00000598020 MFSD2BA6NFX1 497 aa15.63■□□□□ 0.09
PNKP-211ENST00000598020 INMT-MINDY4F8WBC2 141 aa15.63■□□□□ 0.09
PNKP-211ENST00000598020 K7EIM0 57 aa15.63■□□□□ 0.09
PNKP-211ENST00000598020 PRAF2O60831 178 aa15.63■□□□□ 0.09
PNKP-211ENST00000598020 TRBV12-3P01733 135 aa15.63■□□□□ 0.09
PNKP-211ENST00000598020 HTR2BP41595 481 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms