RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PLEKHA3Q9HB20 300 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 CACNG5Q9UF02 275 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 SHPKQ9UHJ6 478 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 C15orf32Q32M92 178 aa15.19■□□□□ 0.02
SHKBP1-214ENST00000597396 SPINK9Q5DT21 86 aa15.19■□□□□ 0.02
SHKBP1-214ENST00000597396 MZT2BQ6NZ67 158 aa15.19■□□□□ 0.02
SHKBP1-214ENST00000597396 IGLV11-55A0A075B6I3 123 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 IGLL1P15814 213 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 ERHP84090 104 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 SLC25A24Q6NUK1 477 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 ZNF343Q6P1L6 599 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 Q6ZRM9 215 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 LYZL2Q7Z4W2 148 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 RCC1LQ96I51 464 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 C20orf85Q9H1P6 137 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 RANGRFQ9HD47 186 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 ENY2Q9NPA8 101 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 THYN1Q9P016 225 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 TBC1D24Q9ULP9 559 aa15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 F11RQ9Y624 299 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-214ENST00000597396 FAM240BA0A1B0GVZ2 78 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 DUXBA0A1W2PPF3 345 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 NDUFB8O95169 186 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 HLA-AP01891 365 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 TCRBP04435 133 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 SULT1A3P0DMM9 295 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 SULT1A4P0DMN0 295 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 ANXA7P20073 488 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 HOXA1P49639 335 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 SLURP1P55000 103 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 ASAH1Q13510 395 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 ANKRD55Q3KP44 614 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 C4orf46Q504U0 113 aa15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 MCRIP2Q9BUT9 160 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 PEF1Q9UBV8 284 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-214ENST00000597396 C9orf170A2RU37 121 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 G3V4G9 280 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 DUS4LO95620 317 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 OR4E1P0C645 316 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 KLK9Q2XQG4 91 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 NMSQ5H8A3 153 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 C1QL4Q86Z23 238 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 OR2C3Q8N628 320 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 OR1L6Q8NGR2 347 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 EEF1AKMT3Q96AZ1 226 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 KLK9Q9UKQ9 250 aa15.16■□□□□ 0.02
SHKBP1-214ENST00000597396 TRAV6A0A075B6T7 132 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 ZP3P21754 424 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 SPCS3P61009 180 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 SMCO1Q147U7 214 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 OXLD1Q5BKU9 147 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 FAM209BQ5JX69 171 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 LYG2Q86SG7 212 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 LRTM2Q8N967 370 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 DCUN1D4Q92564 292 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 CXorf58Q96LI9 332 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 GPR61Q9BZJ8 451 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 DMRT1Q9Y5R6 373 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 S4R3C0 116 aa15.15■□□□□ 0.02
SHKBP1-214ENST00000597396 OVOL1O14753 267 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 TRBV12-3P01733 135 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 IGHV3-23P01764 117 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 HOXD3P31249 432 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 SNCAP37840 140 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 DHRS2Q13268 280 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 SAMD5Q5TGI4 173 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 OR1P1Q8NH06 330 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 OR52E5Q8NH55 327 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 COQ8AQ8NI60 647 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 ENKURQ8TC29 256 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 NUDT15Q9NV35 164 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 CACFD1Q9UGQ2 172 aa15.14■□□□□ 0.01
SHKBP1-214ENST00000597396 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 MFSD2BA6NFX1 497 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 CEBPZOSA8MTT3 80 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 NXPH3O95157 252 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 HOXB5P09067 269 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 MFAP2P55001 183 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 IFITM3Q01628 133 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 AARDQ4LEZ3 155 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 ZNF114Q8NC26 417 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 OR1S1Q8NH92 325 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 DLX4Q92988 240 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 TMED3Q9Y3Q3 217 aa15.13■□□□□ 0.01
SHKBP1-214ENST00000597396 TRBV7-1A0A0A6YYK4 115 aa15.12■□□□□ 0.01
SHKBP1-214ENST00000597396 A0A1B0GU03 582 aa15.12■□□□□ 0.01
SHKBP1-214ENST00000597396 INS-IGF2F8WCM5 200 aa15.12■□□□□ 0.01
SHKBP1-214ENST00000597396 H2AFB2P0C5Z0 115 aa15.12■□□□□ 0.01
SHKBP1-214ENST00000597396 DEFA1P59665 94 aa15.12■□□□□ 0.01
SHKBP1-214ENST00000597396 DEFA3P59666 94 aa15.12■□□□□ 0.01
SHKBP1-214ENST00000597396 RPEL1Q2QD12 228 aa15.12■□□□□ 0.01
SHKBP1-214ENST00000597396 CLEC19AQ6UXS0 136 aa15.12■□□□□ 0.01
SHKBP1-214ENST00000597396 MISP3Q96FF7 219 aa15.12■□□□□ 0.01
SHKBP1-214ENST00000597396 NOTCH1P46531 2555 aa15.11■□□□□ 0.01
SHKBP1-214ENST00000597396 SEC14L6B5MCN3 397 aa15.11■□□□□ 0.01
SHKBP1-214ENST00000597396 SUB1P53999 127 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHKBP1-214ENST00000597396 VN1R17PQ8TDU5 208 aa15.11■□□□□ 0.01
SHKBP1-214ENST00000597396 CCDC140Q96MF4 163 aa15.11■□□□□ 0.01
SHKBP1-214ENST00000597396 HEYLQ9NQ87 328 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms