RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 BTCP35070 178 aa19.88■□□□□ 0.77
TRIM28-204ENST00000594806 IZUMO4Q1ZYL8 232 aa19.88■□□□□ 0.77
TRIM28-204ENST00000594806 AARDQ4LEZ3 155 aa19.88■□□□□ 0.77
TRIM28-204ENST00000594806 PLEKHA3Q9HB20 300 aa19.88■□□□□ 0.77
TRIM28-204ENST00000594806 ERHP84090 104 aaKnown RBP19.87■□□□□ 0.77
TRIM28-204ENST00000594806 SLC35G3Q8N808 338 aa19.87■□□□□ 0.77
TRIM28-204ENST00000594806 OR52E5Q8NH55 327 aa19.87■□□□□ 0.77
TRIM28-204ENST00000594806 CXorf58Q96LI9 332 aa19.87■□□□□ 0.77
TRIM28-204ENST00000594806 F11RQ9Y624 299 aaKnown RBP19.87■□□□□ 0.77
TRIM28-204ENST00000594806 A0A0G2JRQ6 117 aa19.86■□□□□ 0.77
TRIM28-204ENST00000594806 ST8SIA3O43173 380 aa19.86■□□□□ 0.77
TRIM28-204ENST00000594806 SFT2D2O95562 160 aa19.86■□□□□ 0.77
TRIM28-204ENST00000594806 IFNA17P01571 189 aa19.86■□□□□ 0.77
TRIM28-204ENST00000594806 IGLL1P15814 213 aa19.86■□□□□ 0.77
TRIM28-204ENST00000594806 VAMP1P23763 118 aa19.86■□□□□ 0.77
TRIM28-204ENST00000594806 EXOSC2Q13868 293 aaKnown RBP19.86■□□□□ 0.77
TRIM28-204ENST00000594806 OR2C3Q8N628 320 aa19.86■□□□□ 0.77
TRIM28-204ENST00000594806 LRTM2Q8N967 370 aa19.86■□□□□ 0.77
TRIM28-204ENST00000594806 GPR146Q96CH1 333 aa19.86■□□□□ 0.77
TRIM28-204ENST00000594806 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.85■□□□□ 0.77
TRIM28-204ENST00000594806 G3V4G9 280 aa19.85■□□□□ 0.77
TRIM28-204ENST00000594806 DEFA5Q01523 94 aa19.85■□□□□ 0.77
TRIM28-204ENST00000594806 PPP1R1AQ13522 171 aa19.85■□□□□ 0.77
TRIM28-204ENST00000594806 OXLD1Q5BKU9 147 aa19.85■□□□□ 0.77
TRIM28-204ENST00000594806 KPRPQ5T749 579 aaPredicted RBP19.85■□□□□ 0.77
TRIM28-204ENST00000594806 Q6ZRM9 215 aa19.85■□□□□ 0.77
TRIM28-204ENST00000594806 ZNF114Q8NC26 417 aa19.85■□□□□ 0.77
TRIM28-204ENST00000594806 OR1P1Q8NH06 330 aa19.85■□□□□ 0.77
TRIM28-204ENST00000594806 EEF1AKMT3Q96AZ1 226 aa19.85■□□□□ 0.77
TRIM28-204ENST00000594806 ANKRD34BA5PLL1 514 aa19.84■□□□□ 0.77
TRIM28-204ENST00000594806 NDUFB8O95169 186 aa19.84■□□□□ 0.77
TRIM28-204ENST00000594806 SPCS3P61009 180 aa19.84■□□□□ 0.77
TRIM28-204ENST00000594806 C19orf35Q6ZS72 473 aa19.84■□□□□ 0.77
TRIM28-204ENST00000594806 CACNG5Q9UF02 275 aa19.84■□□□□ 0.77
TRIM28-204ENST00000594806 TRBV7-1A0A0A6YYK4 115 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 OVOL1O14753 267 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 SULT1A3P0DMM9 295 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 SULT1A4P0DMN0 295 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 HOXD3P31249 432 aaPredicted RBP19.83■□□□□ 0.77
TRIM28-204ENST00000594806 BEAN1Q3B7T3 259 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 PDLIM3Q53GG5 364 aaPredicted RBP19.83■□□□□ 0.77
TRIM28-204ENST00000594806 NMSQ5H8A3 153 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 SLC25A24Q6NUK1 477 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 MZT2BQ6NZ67 158 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 VN1R17PQ8TDU5 208 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 DCUN1D4Q92564 292 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 ENY2Q9NPA8 101 aa19.83■□□□□ 0.77
TRIM28-204ENST00000594806 WIPF1O43516 503 aa19.82■□□□□ 0.76
TRIM28-204ENST00000594806 UPK1BO75841 260 aa19.82■□□□□ 0.76
TRIM28-204ENST00000594806 SLURP1P55000 103 aa19.82■□□□□ 0.76
TRIM28-204ENST00000594806 C9orf66Q5T8R8 295 aa19.82■□□□□ 0.76
TRIM28-204ENST00000594806 LYZL2Q7Z4W2 148 aa19.82■□□□□ 0.76
TRIM28-204ENST00000594806 DLX4Q92988 240 aaPredicted RBP19.82■□□□□ 0.76
TRIM28-204ENST00000594806 PRR13Q9NZ81 148 aa19.82■□□□□ 0.76
TRIM28-204ENST00000594806 ZMAT5Q9UDW3 170 aaKnown RBP19.82■□□□□ 0.76
TRIM28-204ENST00000594806 NOTCH1P46531 2555 aa19.81■□□□□ 0.76
TRIM28-204ENST00000594806 A0A1B0GU03 582 aa19.81■□□□□ 0.76
TRIM28-204ENST00000594806 INSL3P51460 131 aa19.81■□□□□ 0.76
TRIM28-204ENST00000594806 ASAH1Q13510 395 aa19.81■□□□□ 0.76
TRIM28-204ENST00000594806 TATDN3Q17R31 274 aa19.81■□□□□ 0.76
TRIM28-204ENST00000594806 ATP6V0BQ99437 205 aa19.81■□□□□ 0.76
TRIM28-204ENST00000594806 FLVCR2Q9UPI3 526 aa19.81■□□□□ 0.76
TRIM28-204ENST00000594806 TMED3Q9Y3Q3 217 aa19.81■□□□□ 0.76
TRIM28-204ENST00000594806 DMRT1Q9Y5R6 373 aa19.81■□□□□ 0.76
TRIM28-204ENST00000594806 C9orf170A2RU37 121 aa19.8■□□□□ 0.76
TRIM28-204ENST00000594806 HLA-AP01891 365 aaKnown RBP19.8■□□□□ 0.76
TRIM28-204ENST00000594806 TCRBP04435 133 aa19.8■□□□□ 0.76
TRIM28-204ENST00000594806 OR4E1P0C645 316 aa19.8■□□□□ 0.76
TRIM28-204ENST00000594806 SLC25A6P12236 298 aa19.8■□□□□ 0.76
TRIM28-204ENST00000594806 SNCAP37840 140 aa19.8■□□□□ 0.76
TRIM28-204ENST00000594806 SUB1P53999 127 aaKnown RBP eCLIP19.8■□□□□ 0.765e-7■■■□□ 14.7
TRIM28-204ENST00000594806 SMCO1Q147U7 214 aa19.8■□□□□ 0.76
TRIM28-204ENST00000594806 ANKRD55Q3KP44 614 aa19.8■□□□□ 0.76
TRIM28-204ENST00000594806 SEC14L6B5MCN3 397 aa19.79■□□□□ 0.76
TRIM28-204ENST00000594806 HOXA1P49639 335 aaPredicted RBP19.79■□□□□ 0.76
TRIM28-204ENST00000594806 KLF5Q13887 457 aaPredicted RBP19.79■□□□□ 0.76
TRIM28-204ENST00000594806 RPEL1Q2QD12 228 aa19.79■□□□□ 0.76
TRIM28-204ENST00000594806 LYG2Q86SG7 212 aa19.79■□□□□ 0.76
TRIM28-204ENST00000594806 C1QL4Q86Z23 238 aa19.79■□□□□ 0.76
TRIM28-204ENST00000594806 COQ8AQ8NI60 647 aa19.79■□□□□ 0.76
TRIM28-204ENST00000594806 C20orf85Q9H1P6 137 aa19.79■□□□□ 0.76
TRIM28-204ENST00000594806 FAM240BA0A1B0GVZ2 78 aa19.78■□□□□ 0.76
TRIM28-204ENST00000594806 TRBV12-3P01733 135 aa19.78■□□□□ 0.76
TRIM28-204ENST00000594806 MFAP2P55001 183 aa19.78■□□□□ 0.76
TRIM28-204ENST00000594806 DHRS2Q13268 280 aa19.78■□□□□ 0.76
TRIM28-204ENST00000594806 CCDC140Q96MF4 163 aa19.78■□□□□ 0.76
TRIM28-204ENST00000594806 TBC1D24Q9ULP9 559 aa19.78■□□□□ 0.76
TRIM28-204ENST00000594806 GGCTO75223 188 aaKnown RBP19.77■□□□□ 0.76
TRIM28-204ENST00000594806 C4orf46Q504U0 113 aa19.77■□□□□ 0.76
TRIM28-204ENST00000594806 SPINK9Q5DT21 86 aa19.77■□□□□ 0.76
TRIM28-204ENST00000594806 ZNF502Q8TBZ5 544 aa19.77■□□□□ 0.76
TRIM28-204ENST00000594806 ELOVL1Q9BW60 279 aa19.77■□□□□ 0.76
TRIM28-204ENST00000594806 MFSD2BA6NFX1 497 aa19.76■□□□□ 0.75
TRIM28-204ENST00000594806 CORTO00230 105 aa19.76■□□□□ 0.75
TRIM28-204ENST00000594806 BMPR1BO00238 502 aa19.76■□□□□ 0.75
TRIM28-204ENST00000594806 ANXA7P20073 488 aaKnown RBP19.76■□□□□ 0.75
TRIM28-204ENST00000594806 EGFEM1PQ0D2K5 195 aa19.76■□□□□ 0.75
TRIM28-204ENST00000594806 ACSM6Q6P461 480 aa19.76■□□□□ 0.75
TRIM28-204ENST00000594806 CLEC19AQ6UXS0 136 aa19.76■□□□□ 0.75
TRIM28-204ENST00000594806 GAR1Q9NY12 217 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms