RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 FBXO24O75426 580 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 DEDDO75618 318 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 CCNKO75909 580 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 MPC2O95563 127 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 RLN2P04090 185 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 CRYGCP07315 174 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 CTRB1P17538 263 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 SNCAP37840 140 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 HTR2BP41595 481 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 SLC35B1P78383 322 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 CFHR3Q02985 330 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 CTRB2Q6GPI1 263 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 C11orf87Q6NUJ2 197 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 TTC9CQ8N5M4 171 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.51□□□□□ -1.05
USE1-204ENST00000594399 ZNF114Q8NC26 417 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 SLC24A4Q8NFF2 622 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 OR2T35Q8NGX2 323 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 LINC01006Q8NI28 216 aa8.51□□□□□ -1.05
USE1-204ENST00000594399 RANGRFQ9HD47 186 aaPredicted RBP8.51□□□□□ -1.05
USE1-204ENST00000594399 TNCP24821 2201 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 H3BP45 60 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 CYB5BO43169 146 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 RNASE2P10153 161 aaKnown RBP8.5□□□□□ -1.05
USE1-204ENST00000594399 DEFA4P12838 97 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 NPY1RP25929 384 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 PPIFP30405 207 aaKnown RBP8.5□□□□□ -1.05
USE1-204ENST00000594399 TAS2R30P59541 319 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 RPL23AP62750 156 aaKnown RBP8.5□□□□□ -1.05
USE1-204ENST00000594399 RPP30P78346 268 aaKnown RBP8.5□□□□□ -1.05
USE1-204ENST00000594399 BSXQ3C1V8 233 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 PRSS54Q6PEW0 395 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 C19orf35Q6ZS72 473 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 OR5T1Q8NG75 326 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 OR1P1Q8NH06 330 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 P2RX4Q99571 388 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 WNT10AQ9GZT5 417 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 C11orf1Q9H5F2 150 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 PSENENQ9NZ42 101 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 F11RQ9Y624 299 aaKnown RBP8.5□□□□□ -1.05
USE1-204ENST00000594399 U3KQ87 197 aa8.5□□□□□ -1.05
USE1-204ENST00000594399 TRAV14DV4A0A0A6YYC5 116 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 CLPSL1A2RUU4 121 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 E5RGE8 158 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 H3BUA1 57 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 PLXNB1O43157 2135 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 SOX15O60248 233 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 TSC22D2O75157 780 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 TMEM50AO95807 157 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 IFNA10P01566 189 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 IGHG4P01861 327 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 OR8U8P0C7N1 319 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 MDKP21741 143 aaPredicted RBP8.49□□□□□ -1.05
USE1-204ENST00000594399 SUB1P53999 127 aaKnown RBP eCLIP8.49□□□□□ -1.05
USE1-204ENST00000594399 PAX9P55771 341 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 ATP5IP56385 69 aaPredicted RBP8.49□□□□□ -1.05
USE1-204ENST00000594399 SPANXN5Q5MJ07 72 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 TCTE3Q8IZS6 198 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 KLHDC1Q8N7A1 406 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 OR1L6Q8NGR2 347 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 THAP6Q8TBB0 222 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 ST6GAL2Q96JF0 529 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 SMIM8Q96KF7 97 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 OR4C12Q96R67 309 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 ZNF355PQ9NSJ1 428 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 LYRM2Q9NU23 88 aaPredicted RBP8.49□□□□□ -1.05
USE1-204ENST00000594399 OR5AC2Q9NZP5 309 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 MBD2Q9UBB5 411 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 STRAPQ9Y3F4 350 aaKnown RBP8.49□□□□□ -1.05
USE1-204ENST00000594399 RNF114Q9Y508 228 aa8.49□□□□□ -1.05
USE1-204ENST00000594399 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 IGLV11-55A0A075B6I3 123 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 A0A1B0GUS0 222 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 TMEM89A2RUT3 159 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 C15orf62A8K5M9 175 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 H0YIZ8 118 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 CORTO00230 105 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 IGLV1-40P01703 118 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 PRH1P02810 166 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 LYL1P12980 280 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 HIST1H1BP16401 226 aaKnown RBP8.48□□□□□ -1.05
USE1-204ENST00000594399 CAV2P51636 162 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 RAB11AP62491 216 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 FOXL1Q12952 345 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 C2orf83Q53S99 150 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 TEX38Q6PEX7 206 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 CENPVQ7Z7K6 275 aaPredicted RBP8.48□□□□□ -1.05
USE1-204ENST00000594399 ZNF329Q86UD4 541 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 NOXA1Q86UR1 476 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 COMMD1Q8N668 190 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 DCUN1D4Q92564 292 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 RNF126Q9BV68 326 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 SLA2Q9H6Q3 261 aa8.48□□□□□ -1.05
USE1-204ENST00000594399 PAIP2BQ9ULR5 123 aaKnown RBP8.48□□□□□ -1.05
USE1-204ENST00000594399 FXYD6-FXYD2A0A087WZ82 144 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 G3V3Q6 166 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 SMLR1H3BR10 107 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 SCAF4O95104 1147 aaKnown RBP8.47□□□□□ -1.05
USE1-204ENST00000594399 BRI3O95415 125 aa8.47□□□□□ -1.05
USE1-204ENST00000594399 IFNA4P05014 189 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms