RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ZNF833PQ6ZTB9 187 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 OR2C3Q8N628 320 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 FAM213BQ8TBF2 198 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 RBM14Q96PK6 669 aaKnown RBP15.66■□□□□ 0.1
LSM4-203ENST00000593829 S1PR3Q99500 378 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 C16orf95Q9H693 158 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 IGKV1D-33P01593 117 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 IGKV1-33P01594 117 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 CD1BP29016 333 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 OR2B8PP59922 312 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 FBLN7Q53RD9 439 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 FAM71F2Q6NXP2 309 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 TMEM182Q6ZP80 229 aaPredicted RBP15.66■□□□□ 0.1
LSM4-203ENST00000593829 HSD17B11Q8NBQ5 300 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 LINC01006Q8NI28 216 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 SLC25A33Q9BSK2 321 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 GGACTQ9BVM4 153 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 IGHV3-72A0A0B4J1Y9 119 aa15.65■□□□□ 0.1
LSM4-203ENST00000593829 CLPSL1A2RUU4 121 aa15.65■□□□□ 0.1
LSM4-203ENST00000593829 OR13C7P0DN81 318 aa15.65■□□□□ 0.1
LSM4-203ENST00000593829 SPIN2AQ99865 258 aa15.65■□□□□ 0.1
LSM4-203ENST00000593829 SPIN2BQ9BPZ2 258 aa15.65■□□□□ 0.1
LSM4-203ENST00000593829 SRP19P09132 144 aaKnown RBP15.64■□□□□ 0.09
LSM4-203ENST00000593829 TMEM11P17152 192 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 KIAA0141Q14154 515 aaPredicted RBP15.64■□□□□ 0.09
LSM4-203ENST00000593829 DPPA3Q6W0C5 159 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 SLC25A31Q9H0C2 315 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 RNF150Q9ULK6 438 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 DUXBA0A1W2PPF3 345 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 HSPB1P04792 205 aaKnown RBP15.64■□□□□ 0.09
LSM4-203ENST00000593829 RND3P61587 244 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 EBI3Q14213 229 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 HNF4GQ14541 408 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 H1FOOQ8IZA3 346 aaPredicted RBP15.64■□□□□ 0.09
LSM4-203ENST00000593829 C3orf56Q8N813 242 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 TMEM56Q96MV1 263 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 MRPL20Q9BYC9 149 aaKnown RBP15.64■□□□□ 0.09
LSM4-203ENST00000593829 TMEM56-RWDD3S4R434 201 aa15.64■□□□□ 0.09
LSM4-203ENST00000593829 ATP6V0CP27449 155 aa15.63■□□□□ 0.09
LSM4-203ENST00000593829 GPR12P47775 334 aa15.63■□□□□ 0.09
LSM4-203ENST00000593829 PHLDA2Q53GA4 152 aa15.63■□□□□ 0.09
LSM4-203ENST00000593829 RPL39P5Q59GN2 51 aa15.63■□□□□ 0.09
LSM4-203ENST00000593829 ZNF506Q5JVG8 444 aa15.63■□□□□ 0.09
LSM4-203ENST00000593829 OR10G4Q8NGN3 311 aa15.63■□□□□ 0.09
LSM4-203ENST00000593829 OR2T10Q8NGZ9 312 aa15.63■□□□□ 0.09
LSM4-203ENST00000593829 GNPNAT1Q96EK6 184 aaPredicted RBP15.63■□□□□ 0.09
LSM4-203ENST00000593829 EAF1Q96JC9 268 aaPredicted RBP15.63■□□□□ 0.09
LSM4-203ENST00000593829 RNF114Q9Y508 228 aa15.63■□□□□ 0.09
LSM4-203ENST00000593829 PUS1Q9Y606 427 aaKnown RBP eCLIP15.63■□□□□ 0.09
LSM4-203ENST00000593829 H3BQ15 152 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 FXYD4P59646 89 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 SLC35G3Q8N808 338 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 OR2G3Q8NGZ4 309 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 NABP2Q9BQ15 211 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 PRSS22Q9GZN4 317 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 LYRM2Q9NU23 88 aaPredicted RBP15.62■□□□□ 0.09
LSM4-203ENST00000593829 RBM7Q9Y580 266 aaKnown RBP15.62■□□□□ 0.09
LSM4-203ENST00000593829 STAB1Q9NY15 2570 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 M0QZK8 103 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 MOSP00540 346 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 CD81P60033 236 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 HERV-K104P61576 105 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 BLCAPP62952 87 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 BAXQ07812 192 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 OR2T6Q8NHC8 308 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 RBMXL1Q96E39 390 aaKnown RBP15.62■□□□□ 0.09
LSM4-203ENST00000593829 RARRES2Q99969 163 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 TMEM222Q9H0R3 208 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 MOB4Q9Y3A3 225 aa15.62■□□□□ 0.09
LSM4-203ENST00000593829 C3orf85A0A1B0GTC6 90 aa15.61■□□□□ 0.09
LSM4-203ENST00000593829 IGSF23A1L1A6 192 aa15.61■□□□□ 0.09
LSM4-203ENST00000593829 MPPED1O15442 326 aa15.61■□□□□ 0.09
LSM4-203ENST00000593829 NKX2-1P43699 371 aaPredicted RBP15.61■□□□□ 0.09
LSM4-203ENST00000593829 OR2B11Q5JQS5 317 aa15.61■□□□□ 0.09
LSM4-203ENST00000593829 SLC35E3Q7Z769 313 aa15.61■□□□□ 0.09
LSM4-203ENST00000593829 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.61■□□□□ 0.09
LSM4-203ENST00000593829 OR2D2Q9H210 308 aa15.61■□□□□ 0.09
LSM4-203ENST00000593829 ZNF702PQ9H963 129 aa15.61■□□□□ 0.09
LSM4-203ENST00000593829 TENM1Q9UKZ4 2725 aa15.61■□□□□ 0.09
LSM4-203ENST00000593829 SEC14L6B5MCN3 397 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 TGOLN2O43493 480 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 HBE1P02100 147 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 CT45A6P0DMU7 189 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 CT45A5P0DMU8 189 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 CT45A7P0DMV0 189 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 RPS10P46783 165 aaKnown RBP15.6■□□□□ 0.09
LSM4-203ENST00000593829 ELOBQ15370 118 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 Q8N2B8 174 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 Q8N6K4 173 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 TMEM252Q8N6L7 170 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 TVP23CQ96ET8 276 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 TP53RKQ96S44 253 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 GAB2Q9UQC2 676 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 SIGLEC9Q9Y336 463 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 OR2W1Q9Y3N9 320 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 ELOA3CA0A087WX78 387 aaPredicted RBP15.6■□□□□ 0.09
LSM4-203ENST00000593829 FAM24AA6NFZ4 105 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 IFITM10A6NMD0 228 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 B4DEV8 164 aa15.6■□□□□ 0.09
LSM4-203ENST00000593829 PPYP01298 95 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms