RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 NDUFA4O00483 81 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 YIF1AO95070 293 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 FGF2P09038 288 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 RPL35AP18077 110 aaKnown RBP13.36□□□□□ -0.27
CIRBP-243ENST00000593128 NAT1P18440 290 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 APOC4P55056 127 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 RNASE12Q5GAN4 147 aaKnown RBP13.36□□□□□ -0.27
CIRBP-243ENST00000593128 SPSB3Q6PJ21 355 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 TBC1D26Q86UD7 250 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 LYSMD2Q8IV50 215 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 OR4A16Q8NH70 328 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 FKBP11Q9NYL4 201 aa13.36□□□□□ -0.27
CIRBP-243ENST00000593128 IGKV3-7A0A075B6H7 116 aa13.35□□□□□ -0.27
CIRBP-243ENST00000593128 A0A087WXM4 84 aa13.35□□□□□ -0.27
CIRBP-243ENST00000593128 IGHV3-49A0A0A0MS15 119 aa13.35□□□□□ -0.27
CIRBP-243ENST00000593128 A0A0J9YWU9 116 aa13.35□□□□□ -0.27
CIRBP-243ENST00000593128 IGHV3-48P01763 117 aa13.35□□□□□ -0.27
CIRBP-243ENST00000593128 DEFB135Q30KP9 77 aa13.35□□□□□ -0.27
CIRBP-243ENST00000593128 H2BFWTQ7Z2G1 175 aa13.35□□□□□ -0.27
CIRBP-243ENST00000593128 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
CIRBP-243ENST00000593128 SLC25A46Q96AG3 418 aa13.35□□□□□ -0.27
CIRBP-243ENST00000593128 PLECQ15149 4684 aaKnown RBP13.35□□□□□ -0.27
CIRBP-243ENST00000593128 ALMS1Q8TCU4 4167 aa13.34□□□□□ -0.27
CIRBP-243ENST00000593128 C15orf61A6NNL5 157 aa13.34□□□□□ -0.27
CIRBP-243ENST00000593128 K7EIM0 57 aa13.34□□□□□ -0.27
CIRBP-243ENST00000593128 TSPAN4O14817 238 aa13.34□□□□□ -0.27
CIRBP-243ENST00000593128 CTSDP07339 412 aaPredicted RBP13.34□□□□□ -0.27
CIRBP-243ENST00000593128 TFPI2P48307 235 aa13.34□□□□□ -0.27
CIRBP-243ENST00000593128 NCS1P62166 190 aa13.34□□□□□ -0.27
CIRBP-243ENST00000593128 LPCAT3Q6P1A2 487 aa13.34□□□□□ -0.27
CIRBP-243ENST00000593128 PINX1Q96BK5 328 aaKnown RBP13.34□□□□□ -0.27
CIRBP-243ENST00000593128 TSC22D3Q99576 134 aa13.34□□□□□ -0.27
CIRBP-243ENST00000593128 BIRC6Q9NR09 4857 aa13.34□□□□□ -0.27
CIRBP-243ENST00000593128 OR4C46A6NHA9 309 aa13.33□□□□□ -0.28
CIRBP-243ENST00000593128 F8W735 103 aaPredicted RBP13.33□□□□□ -0.28
CIRBP-243ENST00000593128 NUPL2O15504 423 aaKnown RBP13.33□□□□□ -0.28
CIRBP-243ENST00000593128 SPRY2O43597 315 aa13.33□□□□□ -0.28
CIRBP-243ENST00000593128 ADMP35318 185 aa13.33□□□□□ -0.28
CIRBP-243ENST00000593128 VBP1P61758 197 aa13.33□□□□□ -0.28
CIRBP-243ENST00000593128 SPINK9Q5DT21 86 aa13.33□□□□□ -0.28
CIRBP-243ENST00000593128 GPX8Q8TED1 209 aa13.33□□□□□ -0.28
CIRBP-243ENST00000593128 MRGPRFQ96AM1 343 aa13.33□□□□□ -0.28
CIRBP-243ENST00000593128 TMEM14BQ9NUH8 114 aa13.33□□□□□ -0.28
CIRBP-243ENST00000593128 FAM25AB3EWG3 89 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 FAM25CB3EWG5 89 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 FAM25GB3EWG6 89 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 M0QYG6 137 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 HPGDSO60760 199 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 TNFAIP8O95379 198 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 PGAM2P15259 253 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 RCVRNP35243 200 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 RELQ04864 619 aaPredicted RBP13.32□□□□□ -0.28
CIRBP-243ENST00000593128 ODF3L2Q3SX64 289 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 LYG2Q86SG7 212 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 APRG1Q8IVJ8 170 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 STPG3Q8N7X2 389 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 OR1P1Q8NH06 330 aa13.32□□□□□ -0.28
CIRBP-243ENST00000593128 IGHV3OR16-13A0A075B7E8 117 aa13.31□□□□□ -0.28
CIRBP-243ENST00000593128 IGHV3-74A0A0B4J1X5 117 aa13.31□□□□□ -0.28
CIRBP-243ENST00000593128 MT-CO2P00403 227 aa13.31□□□□□ -0.28
CIRBP-243ENST00000593128 APOA1P02647 267 aa13.31□□□□□ -0.28
CIRBP-243ENST00000593128 MFAP4P55083 255 aa13.31□□□□□ -0.28
CIRBP-243ENST00000593128 TMEM116Q8NCL8 245 aa13.31□□□□□ -0.28
CIRBP-243ENST00000593128 RNF2Q99496 336 aa13.31□□□□□ -0.28
CIRBP-243ENST00000593128 FUNDC2Q9BWH2 189 aa13.31□□□□□ -0.28
CIRBP-243ENST00000593128 SCPEP1Q9HB40 452 aa13.31□□□□□ -0.28
CIRBP-243ENST00000593128 C15orf62A8K5M9 175 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 K7EMT4 169 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 GNG7O60262 68 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 LY6G6CO95867 125 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 IGKV1-39P01597 117 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 IGKV1D-39P04432 117 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 CTSGP08311 255 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 ELK1P19419 428 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 PI3P19957 117 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 BMI1P35226 326 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.28
CIRBP-243ENST00000593128 IZUMO4Q1ZYL8 232 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 GBGT1Q8N5D6 347 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 SEC22AQ96IW7 307 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 ATP6V0BQ99437 205 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 RHPN1-AS1Q9BWJ2 59 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 SMPXQ9UHP9 88 aa13.3□□□□□ -0.28
CIRBP-243ENST00000593128 IGHV7-4-1A0A0J9YVY3 117 aa13.29□□□□□ -0.28
CIRBP-243ENST00000593128 ERHP84090 104 aaKnown RBP13.29□□□□□ -0.28
CIRBP-243ENST00000593128 PRCDQ00LT1 54 aa13.29□□□□□ -0.28
CIRBP-243ENST00000593128 ZNF124Q15973 351 aa13.29□□□□□ -0.28
CIRBP-243ENST00000593128 Q6ZWC4 215 aa13.29□□□□□ -0.28
CIRBP-243ENST00000593128 CADM3Q8N126 398 aa13.29□□□□□ -0.28
CIRBP-243ENST00000593128 CMTM3Q96MX0 182 aa13.29□□□□□ -0.28
CIRBP-243ENST00000593128 C6orf62Q9GZU0 229 aaPredicted RBP13.29□□□□□ -0.28
CIRBP-243ENST00000593128 I3L2K1 104 aa13.28□□□□□ -0.28
CIRBP-243ENST00000593128 UBE2CO00762 179 aa13.28□□□□□ -0.28
CIRBP-243ENST00000593128 CHEK1O14757 476 aa13.28□□□□□ -0.28
CIRBP-243ENST00000593128 WFDC3Q8IUB2 231 aa13.28□□□□□ -0.28
CIRBP-243ENST00000593128 GALNT14Q96FL9 552 aa13.28□□□□□ -0.28
CIRBP-243ENST00000593128 TP53TG1Q9Y2A0 90 aa13.28□□□□□ -0.28
CIRBP-243ENST00000593128 TRAV14DV4A0A0A6YYC5 116 aa13.27□□□□□ -0.29
CIRBP-243ENST00000593128 FCGR2BP31994 310 aaPredicted RBP13.27□□□□□ -0.29
CIRBP-243ENST00000593128 RORCP51449 518 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms