RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 GRIFINA4D1Z8 144 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 NPPCP23582 126 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 TAS2R60P59551 318 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 GSN-AS1Q9NRJ2 163 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 LRTM2Q8N967 370 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 ZIC4Q8N9L1 334 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 WFIKKN1Q96NZ8 548 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 ATP5LO75964 103 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 CLDND2Q8NHS1 167 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 FAM131CQ96AQ9 280 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 REPIN1Q9BWE0 567 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 PINLYPA6NC86 204 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 CBLN1P23435 193 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 HIST1H1AQ02539 215 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 TTC32Q5I0X7 151 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 LINC00114Q6XXX2 140 aa11.2□□□□□ -0.62
SMARCA4-216ENST00000591545 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 RNF222A6NCQ9 220 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 MSGN1A6NI15 193 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 SNRPCP09234 159 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 FAM201AQ5SY85 155 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 Q6ZS92 163 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 TCF23Q7RTU1 214 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 SCN2AQ99250 2005 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 C7orf71A4D174 169 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 H7C2G1 150 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 K7ENP7 123 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 GPX1P07203 203 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 CACNG8Q8WXS5 425 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 CACNA1HO95180 2353 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 CELA3BP08861 270 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 NBL1P41271 181 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 LINC00305Q7Z4B0 112 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 GPHA2Q96T91 129 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 A0A1B0GTI1 187 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 HOXA5P20719 270 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 MBNL2Q5VZF2 373 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 RTBDNQ9BSG5 229 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 SDF2L1Q9HCN8 221 aa11.19□□□□□ -0.62
SMARCA4-216ENST00000591545 PRSS2P07478 247 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 IGFBP3P17936 291 aaPredicted RBP11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 SSC4DQ8WTU2 575 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 LINC00312Q9Y6C7 94 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 TRBV20OR9-2A0A075B6H5 130 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 BIVMQ86UB2 503 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 TSC2P49815 1807 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 ANKRD36A6QL64 1941 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 A0A1B0GV90 55 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 H7C1H1 209 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 RRHO14718 337 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 MPZP25189 248 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 PRSS22Q9GZN4 317 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 C12orf77C9JDV5 145 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 NBEAP1P0C6P0 100 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 EFNA4P52798 201 aa11.18□□□□□ -0.62
SMARCA4-216ENST00000591545 PEX7O00628 323 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 RNASEH2CQ8TDP1 164 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 KCNS1Q96KK3 526 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 GEMIN7Q9H840 131 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 PLSCR4Q9NRQ2 329 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 TBX6O95947 436 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 CTAG1AP78358 180 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 AKAP6Q13023 2319 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 IGKV1D-43A0A0B4J1Z2 117 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 KBTBD11-OT1A0A1B0GTJ5 212 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 IGKV1D-33P01593 117 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 IGKV1-33P01594 117 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 OTX1P32242 354 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 NUTF2P61970 127 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 ZNF837Q96EG3 531 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 PRELID3AQ96N28 172 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 A0A1B0GUT8 65 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 CIARTQ8N365 385 aaPredicted RBP11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 BMPERQ8N8U9 685 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 VCX2Q9H322 139 aa11.17□□□□□ -0.62
SMARCA4-216ENST00000591545 PLXNA3P51805 1871 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 TRAV14DV4A0A0A6YYC5 116 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 TBL2Q9Y4P3 447 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 F11RQ9Y624 299 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 FAM159AQ6UWV7 190 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 ZNF525Q8N782 197 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 TMEM190Q8WZ59 177 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 IGHV1-18A0A0C4DH31 117 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 MRPL13Q9BYD1 178 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 RPP21Q9H633 154 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 IGKV3D-15A0A087WSY6 115 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 IZUMO1RA6ND01 250 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 GTF3AQ92664 365 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-216ENST00000591545 MOSP00540 346 aa11.15□□□□□ -0.62
SMARCA4-216ENST00000591545 FOXF2Q12947 444 aa11.15□□□□□ -0.62
SMARCA4-216ENST00000591545 C1QL2Q7Z5L3 287 aa11.15□□□□□ -0.62
SMARCA4-216ENST00000591545 PPP1R27Q86WC6 154 aa11.15□□□□□ -0.62
SMARCA4-216ENST00000591545 GLRX5Q86SX6 157 aa11.15□□□□□ -0.62
SMARCA4-216ENST00000591545 VKORC1L1Q8N0U8 176 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms