RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CADM3Q8N126 398 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 LRTM2Q8N967 370 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 IL17DQ8TAD2 202 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 MAFIPQ8WZ33 124 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 RITA1Q96K30 269 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 TSNAXQ99598 290 aaKnown RBP7.26□□□□□ -1.25
BRCA1-226ENST00000591534 TM2D3Q9BRN9 247 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 PARP12Q9H0J9 701 aaKnown RBP7.26□□□□□ -1.25
BRCA1-226ENST00000591534 FBXL15Q9H469 300 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 C5orf66Q9H5L9 145 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 WASHC3Q9Y3C0 194 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 ALG5Q9Y673 324 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 IGHV4OR15-8A0A075B7B6 117 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 A0A087WW49 117 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 SPDEFO95238 335 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 CDS2O95674 445 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 APOA2P02652 100 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 TRGV3P03979 118 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 RLN2P04090 185 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 GIPP09681 153 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-226ENST00000591534 IGHV4-30-4P0DP06 118 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 SLC25A6P12236 298 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 F2RP25116 425 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 GNRHRP30968 328 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 GTSCR1Q86UQ5 136 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 RRNAD1Q96FB5 475 aaKnown RBP7.25□□□□□ -1.25
BRCA1-226ENST00000591534 ABHD14BQ96IU4 210 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 TMEM68Q96MH6 324 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 PDCD10Q9BUL8 212 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 TMEM222Q9H0R3 208 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 OR2D2Q9H210 308 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 TUBA4BQ9H853 241 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 ZNF355PQ9NSJ1 428 aa7.25□□□□□ -1.25
BRCA1-226ENST00000591534 METTL1Q9UBP6 276 aaKnown RBP7.25□□□□□ -1.25
BRCA1-226ENST00000591534 IGKV1D-8A0A087WSZ0 117 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 C9orf118A6NHY6 69 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 PAX4O43316 350 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 JTBO76095 146 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 CNIH1O95406 144 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 HRASP01112 189 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 IGLV1-51P01701 117 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 IGHV3-11P01762 117 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 FGF2P09038 288 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 CT45A6P0DMU7 189 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 CT45A5P0DMU8 189 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 CT45A7P0DMV0 189 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 ANXA7P20073 488 aaKnown RBP7.24□□□□□ -1.25
BRCA1-226ENST00000591534 MALP21145 153 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 NUP62P37198 522 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-226ENST00000591534 SMCO1Q147U7 214 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 TCTE3Q8IZS6 198 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 LFNGQ8NES3 379 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 OR4S2Q8NH73 311 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 RNASE11Q8TAA1 199 aaKnown RBP7.24□□□□□ -1.25
BRCA1-226ENST00000591534 VSTM2AQ8TAG5 236 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 RBPMSQ93062 196 aaKnown RBP7.24□□□□□ -1.25
BRCA1-226ENST00000591534 MS4A10Q96PG2 267 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 RTBDNQ9BSG5 229 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-226ENST00000591534 IFI27L2Q9H2X8 130 aa7.24□□□□□ -1.25
BRCA1-226ENST00000591534 IGKV1-6A0A0C4DH72 117 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 H0YJW9 148 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 SOX15O60248 233 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 MED6O75586 246 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 PGLYRP1O75594 196 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-226ENST00000591534 HPRT1P00492 218 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 HNRNPCP07910 306 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-226ENST00000591534 SULT1A3P0DMM9 295 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 SULT1A4P0DMN0 295 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 GYPEP15421 78 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 PVALBP20472 110 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-226ENST00000591534 UCP1P25874 307 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 LGALS7P47929 136 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 RPS16P62249 146 aaKnown RBP7.23□□□□□ -1.25
BRCA1-226ENST00000591534 NDPQ00604 133 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 PPP1R1AQ13522 171 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 FXYD3Q14802 87 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 PSG5Q15238 335 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 ZFAND6Q6FIF0 208 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 LCN12Q6JVE5 192 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 TBC1D26Q86UD7 250 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 PDPNQ86YL7 162 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 CASTOR1Q8WTX7 329 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 LSM10Q969L4 123 aaKnown RBP7.23□□□□□ -1.25
BRCA1-226ENST00000591534 HYLS1Q96M11 299 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 TMEM56Q96MV1 263 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 CLCC1Q96S66 551 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 NMES1Q9C002 83 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 ZNF436Q9C0F3 470 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-226ENST00000591534 FXYD6Q9H0Q3 95 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 PLEKHA2Q9HB19 425 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 TMEM140Q9NV12 185 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 FKBP11Q9NYL4 201 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 OR1A1Q9P1Q5 309 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 TMEM56-RWDD3S4R434 201 aa7.23□□□□□ -1.25
BRCA1-226ENST00000591534 A0A1B0GU03 582 aa7.22□□□□□ -1.25
BRCA1-226ENST00000591534 C5orf51A6NDU8 294 aa7.22□□□□□ -1.25
BRCA1-226ENST00000591534 FAM90A26D6RGX4 464 aa7.22□□□□□ -1.25
BRCA1-226ENST00000591534 FCN1O00602 326 aa7.22□□□□□ -1.25
BRCA1-226ENST00000591534 CA2P00918 260 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms