RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 FAM90A9PA6NNJ1 464 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 SAA1P0DJI8 122 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 MDS2Q8NDY4 140 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 PRR7Q8TB68 274 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 HILPDAQ9Y5L2 63 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 LYPD6BQ8NI32 183 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 GGTLC1Q9BX51 225 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 PTPRZ1P23471 2315 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 TRAV9-1A0A075B6T8 112 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 UPK2O00526 184 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 PMCHL1Q16048 86 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 TMEM144Q7Z5S9 345 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 LINC01551Q86U37 167 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 C11orf42Q8N5U0 333 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 EAF1Q96JC9 268 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 RBM14Q96PK6 669 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 PI4KAP42356 2102 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 TRAV3A0A0B4J244 114 aa14.21□□□□□ -0.13
SMARCA4-215ENST00000590574 TEX38Q6PEX7 206 aa14.21□□□□□ -0.13
SMARCA4-215ENST00000590574 OR8A1Q8NGG7 326 aa14.21□□□□□ -0.13
SMARCA4-215ENST00000590574 NDUFAF3Q9BU61 184 aa14.21□□□□□ -0.13
SMARCA4-215ENST00000590574 PLA2G2EQ9NZK7 142 aa14.21□□□□□ -0.13
SMARCA4-215ENST00000590574 SPATA31B1PQ5VZV4 182 aa14.21□□□□□ -0.13
SMARCA4-215ENST00000590574 GRAMD2BQ96HH9 432 aa14.21□□□□□ -0.13
SMARCA4-215ENST00000590574 SCNM1Q9BWG6 230 aa14.21□□□□□ -0.13
SMARCA4-215ENST00000590574 PARD6GQ9BYG4 376 aaPredicted RBP14.21□□□□□ -0.13
SMARCA4-215ENST00000590574 CTAG1AP78358 180 aa14.21□□□□□ -0.14
SMARCA4-215ENST00000590574 MGST2Q99735 147 aa14.21□□□□□ -0.14
SMARCA4-215ENST00000590574 IGKV1-39P01597 117 aa14.21□□□□□ -0.14
SMARCA4-215ENST00000590574 IGKV1D-39P04432 117 aa14.21□□□□□ -0.14
SMARCA4-215ENST00000590574 MLNRO43193 412 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 OR2J3O76001 311 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 DNAJC13O75165 2243 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 LOC389332A0A1B0GUA5 103 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 ORM1P02763 201 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 FAM87AP0C7U9 286 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 STAG3L2P0CL84 134 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 STAG3L3P0CL85 134 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 SELLP14151 372 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 GPX4P36969 197 aaPredicted RBP14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 ZNF726P1Q15940 193 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 OR52E5Q8NH55 327 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 MRPL37Q9BZE1 423 aaKnown RBP14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 DKK1O94907 266 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 WNT10AQ9GZT5 417 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 MUC22E2RYF6 1773 aaPredicted RBP14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 BMPR1BO00238 502 aa14.2□□□□□ -0.14
SMARCA4-215ENST00000590574 PEX7O00628 323 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 KIR2DL2P43627 348 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 ACTL10Q5JWF8 245 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 MBNL2Q5VZF2 373 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 SNRNP40Q96DI7 357 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 IGHV2-5P01817 119 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 DPRXA6NFQ7 191 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 C15orf62A8K5M9 175 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 SRRM5B3KS81 715 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 SIAH2O43255 324 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 CCL3L1P16619 93 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 KCNS1Q96KK3 526 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 LEPROTL1O95214 131 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 TIMP3P35625 211 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 LGALS7P47929 136 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 C19orf35Q6ZS72 473 aa14.19□□□□□ -0.14
SMARCA4-215ENST00000590574 CDX4O14627 284 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 SEPSECSQ9HD40 501 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 MBNL3Q9NUK0 354 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 LINC00312Q9Y6C7 94 aa14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 TBR1Q16650 682 aa14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 FAM19A2Q8N3H0 131 aa14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 FOXH1O75593 365 aa14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 S100A4P26447 101 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 IFITM10A6NMD0 228 aa14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 RNFT1Q5M7Z0 435 aa14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 BPIFA4PQ86YQ2 179 aa14.18□□□□□ -0.14
SMARCA4-215ENST00000590574 CACNG8Q8WXS5 425 aa14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 TMUB1Q9BVT8 246 aa14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 TMEM106BQ9NUM4 274 aa14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 TCTAP57738 103 aa14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 PRCDQ00LT1 54 aa14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 RELBQ01201 579 aa14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 WDR86Q86TI4 376 aa14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 GPR6P46095 362 aaPredicted RBP14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 FOXA3P55318 350 aaPredicted RBP14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 FAM53AQ6NSI3 398 aaPredicted RBP14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 GOLT1AQ6ZVE7 132 aa14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 NEU1Q99519 415 aa14.17□□□□□ -0.14
SMARCA4-215ENST00000590574 KIAA2026Q5HYC2 2103 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 FCGR2BP31994 310 aaPredicted RBP14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 HBBP68871 147 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 FOXL1Q12952 345 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 SRSF12Q8WXF0 261 aaKnown RBP14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 PPIAL4CA0A0B4J2A2 164 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 IGHV1-69-2A0A0G2JMI3 117 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 IZUMO1RA6ND01 250 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 NBEAP1P0C6P0 100 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 PPIAL4GP0DN37 164 aa14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 BTF3P20290 206 aaKnown RBP14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 HOXA4Q00056 320 aaPredicted RBP14.16□□□□□ -0.14
SMARCA4-215ENST00000590574 TMEM189A5PLL7 270 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms