RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 ERHP84090 104 aaKnown RBP9.4□□□□□ -0.9
APOC1-206ENST00000590334 SRSF4Q08170 494 aaKnown RBP9.4□□□□□ -0.9
APOC1-206ENST00000590334 KIAA0141Q14154 515 aaPredicted RBP9.4□□□□□ -0.9
APOC1-206ENST00000590334 SPINK9Q5DT21 86 aa9.4□□□□□ -0.9
APOC1-206ENST00000590334 PVRIGQ6DKI7 326 aa9.4□□□□□ -0.9
APOC1-206ENST00000590334 Q6ZNX1 250 aa9.4□□□□□ -0.9
APOC1-206ENST00000590334 DTD1Q8TEA8 209 aa9.4□□□□□ -0.9
APOC1-206ENST00000590334 FANCD2OSQ96PS1 177 aa9.4□□□□□ -0.9
APOC1-206ENST00000590334 NMES1Q9C002 83 aa9.4□□□□□ -0.9
APOC1-206ENST00000590334 KLK15Q9H2R5 256 aa9.4□□□□□ -0.9
APOC1-206ENST00000590334 MGAT4CQ9UBM8 478 aa9.4□□□□□ -0.9
APOC1-206ENST00000590334 F11RQ9Y624 299 aaKnown RBP9.4□□□□□ -0.9
APOC1-206ENST00000590334 IGLV11-55A0A075B6I3 123 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 CEBPZOSA8MTT3 80 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 FAM25EA8MYX2 175 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 SYNGR2O43760 224 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 LY86O95711 162 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 MBPP02686 304 aaPredicted RBP9.39□□□□□ -0.91
APOC1-206ENST00000590334 PF4V1P10720 104 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 HIST1H1BP16401 226 aaKnown RBP9.39□□□□□ -0.91
APOC1-206ENST00000590334 HTR2BP41595 481 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 HOXA1P49639 335 aaPredicted RBP9.39□□□□□ -0.91
APOC1-206ENST00000590334 TMEM65Q6PI78 240 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 C12orf54Q6X4T0 127 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 OR1L6Q8NGR2 347 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 OR1P1Q8NH06 330 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 P2RX4Q99571 388 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 MED28Q9H204 178 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 HIPK2Q9H2X6 1198 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 ENY2Q9NPA8 101 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 HEYLQ9NQ87 328 aaPredicted RBP9.39□□□□□ -0.91
APOC1-206ENST00000590334 ZFP57Q9NU63 452 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 GSKIPQ9P0R6 139 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 DMRT1Q9Y5R6 373 aa9.39□□□□□ -0.91
APOC1-206ENST00000590334 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 CYB5BO43169 146 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 SIX6O95475 246 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 TRGV3P03979 118 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 RPLP1P05386 114 aaKnown RBP9.38□□□□□ -0.91
APOC1-206ENST00000590334 RNASE2P10153 161 aaKnown RBP9.38□□□□□ -0.91
APOC1-206ENST00000590334 DEFA4P12838 97 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 CXCL3P19876 107 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 SNCAP37840 140 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 CDX1P47902 265 aaPredicted RBP9.38□□□□□ -0.91
APOC1-206ENST00000590334 MFAP2P55001 183 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 ATP5IP56385 69 aaPredicted RBP9.38□□□□□ -0.91
APOC1-206ENST00000590334 CYCSP99999 105 aaKnown RBP9.38□□□□□ -0.91
APOC1-206ENST00000590334 FCN2Q15485 313 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 FAM223AQ8IWN6 122 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 ZNF491Q8N8L2 437 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 NECAP1Q8NC96 275 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 OR11H7Q8NGC8 314 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 UBE2E2Q96LR5 201 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 CIB3Q96Q77 187 aaPredicted RBP9.38□□□□□ -0.91
APOC1-206ENST00000590334 MAGT1Q9H0U3 335 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 RCL1Q9Y2P8 373 aaKnown RBP9.38□□□□□ -0.91
APOC1-206ENST00000590334 TSSC4Q9Y5U2 329 aaPredicted RBP9.38□□□□□ -0.91
APOC1-206ENST00000590334 U3KQ87 197 aa9.38□□□□□ -0.91
APOC1-206ENST00000590334 A0A0G2JLM5 398 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 PRH1P02810 166 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 SUB1P53999 127 aaKnown RBP eCLIP9.37□□□□□ -0.91
APOC1-206ENST00000590334 TPPP2P59282 170 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 TAS2R30P59541 319 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 POLR2GP62487 172 aaKnown RBP eCLIP9.37□□□□□ -0.91
APOC1-206ENST00000590334 C2orf83Q53S99 150 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 C11orf87Q6NUJ2 197 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 LCNL1Q6ZST4 164 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 C3orf56Q8N813 242 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 ASB13Q8WXK3 278 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 USMG5Q96IX5 58 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 SMIM8Q96KF7 97 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 MS4A10Q96PG2 267 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 CITED2Q99967 270 aaPredicted RBP9.37□□□□□ -0.91
APOC1-206ENST00000590334 C11orf1Q9H5F2 150 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 ZNF355PQ9NSJ1 428 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 THYN1Q9P016 225 aa9.37□□□□□ -0.91
APOC1-206ENST00000590334 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 TCRBV4S1A1TA0A5B7 111 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 ADARB2-AS1A8MUL3 147 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 K7EPK0 472 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 WRBO00258 174 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 SSSCA1O60232 199 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 TMEM50AO95807 157 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 SCGB1D2O95969 90 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 PAX9P55771 341 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 RPL23AP62750 156 aaKnown RBP9.36□□□□□ -0.91
APOC1-206ENST00000590334 RHOGP84095 191 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 RAB32Q13637 225 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 SLC25A24Q6NUK1 477 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 SHISA2Q6UWI4 295 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 NOXA1Q86UR1 476 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 NDUFA11Q86Y39 141 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 C11orf44Q8N8P7 122 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 SLC24A4Q8NFF2 622 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 TMEM170AQ8WVE7 144 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 WDR89Q96FK6 387 aaPredicted RBP9.36□□□□□ -0.91
APOC1-206ENST00000590334 RAB40CQ96S21 281 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 FBXL7Q9UJT9 491 aa9.36□□□□□ -0.91
APOC1-206ENST00000590334 VWFP04275 2813 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms