RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 IGHV3OR16-8A0A075B7F1 116 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 K7EIM0 57 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 HLA-DMAP28067 261 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 HRH1P35367 487 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 ETV6P41212 452 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 ZNF846Q147U1 533 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 SLC25A24Q6NUK1 477 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 CCDC190Q86UF4 302 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 OR5H2Q8NGV7 314 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 SCARB1Q8WTV0 552 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 TMEM190Q8WZ59 177 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 MARC2Q969Z3 335 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 GGTLC1Q9BX51 225 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 HINT2Q9BX68 163 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 WDR12Q9GZL7 423 aaKnown RBP13.41□□□□□ -0.26
H3F3B-209ENST00000589949 MRPL27Q9P0M9 148 aaKnown RBP13.41□□□□□ -0.26
H3F3B-209ENST00000589949 OR51B2Q9Y5P1 312 aa13.41□□□□□ -0.26
H3F3B-209ENST00000589949 F11RQ9Y624 299 aaKnown RBP13.41□□□□□ -0.26
H3F3B-209ENST00000589949 TRAV25A0A0B4J276 109 aa13.4□□□□□ -0.26
H3F3B-209ENST00000589949 HPGDSO60760 199 aa13.4□□□□□ -0.26
H3F3B-209ENST00000589949 ELLP55199 621 aaPredicted RBP13.4□□□□□ -0.26
H3F3B-209ENST00000589949 ERVK-16P61578 105 aa13.4□□□□□ -0.26
H3F3B-209ENST00000589949 PHLDA2Q53GA4 152 aa13.4□□□□□ -0.26
H3F3B-209ENST00000589949 GPX8Q8TED1 209 aa13.4□□□□□ -0.26
H3F3B-209ENST00000589949 THYN1Q9P016 225 aa13.4□□□□□ -0.26
H3F3B-209ENST00000589949 UFC1Q9Y3C8 167 aa13.4□□□□□ -0.26
H3F3B-209ENST00000589949 BIRC6Q9NR09 4857 aa13.4□□□□□ -0.26
H3F3B-209ENST00000589949 IGKV1-39P01597 117 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 IGKV1D-39P04432 117 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 PRSS3P35030 304 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 TAS2R46P59540 309 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 EWSR1Q01844 656 aaKnown RBP eCLIP13.39□□□□□ -0.27
H3F3B-209ENST00000589949 SPANXN2Q5MJ10 180 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 CADM3Q8N126 398 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 OR1L6Q8NGR2 347 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 LSM10Q969L4 123 aaKnown RBP13.39□□□□□ -0.27
H3F3B-209ENST00000589949 DIRAS2Q96HU8 199 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 C5orf66Q9H5L9 145 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 TMEM14BQ9NUH8 114 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 UBQLN2Q9UHD9 624 aa13.39□□□□□ -0.27
H3F3B-209ENST00000589949 LOC102724200A0A096LPH7 203 aaPredicted RBP13.38□□□□□ -0.27
H3F3B-209ENST00000589949 GPR31O00270 319 aa13.38□□□□□ -0.27
H3F3B-209ENST00000589949 ZNF207O43670 478 aaKnown RBP13.38□□□□□ -0.27
H3F3B-209ENST00000589949 APOA1P02647 267 aa13.38□□□□□ -0.27
H3F3B-209ENST00000589949 THOC7Q6I9Y2 204 aaKnown RBP13.38□□□□□ -0.27
H3F3B-209ENST00000589949 RBPMS2Q6ZRY4 209 aaKnown RBP13.38□□□□□ -0.27
H3F3B-209ENST00000589949 HSD17B13Q7Z5P4 300 aaPredicted RBP13.38□□□□□ -0.27
H3F3B-209ENST00000589949 OR6F1Q8NGZ6 308 aa13.38□□□□□ -0.27
H3F3B-209ENST00000589949 BORCS5Q969J3 196 aa13.38□□□□□ -0.27
H3F3B-209ENST00000589949 BSCL2Q96G97 398 aaPredicted RBP13.38□□□□□ -0.27
H3F3B-209ENST00000589949 C21orf62Q9NYP8 219 aa13.38□□□□□ -0.27
H3F3B-209ENST00000589949 FAM25AB3EWG3 89 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 FAM25CB3EWG5 89 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 FAM25GB3EWG6 89 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 CTSGP08311 255 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 ELK1P19419 428 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 ANKRD55Q3KP44 614 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 ODF3L2Q3SX64 289 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 CMTM1Q8IZ96 169 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 OR2C3Q8N628 320 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 IL17DQ8TAD2 202 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 SEC22AQ96IW7 307 aa13.37□□□□□ -0.27
H3F3B-209ENST00000589949 DAZ1Q9NQZ3 744 aaKnown RBP13.37□□□□□ -0.27
H3F3B-209ENST00000589949 FABP12A6NFH5 140 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 NDUFA4O00483 81 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 TSPAN4O14817 238 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 SNAPC5O75971 98 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 PPP5CP53041 499 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 TBC1D26Q86UD7 250 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 SNX29P2Q8IUI4 249 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 SPAG8Q99932 426 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-209ENST00000589949 SOSTQ9BQB4 213 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 C20orf24Q9BUV8 137 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 PRNDQ9UKY0 176 aa13.36□□□□□ -0.27
H3F3B-209ENST00000589949 C15orf61A6NNL5 157 aa13.35□□□□□ -0.27
H3F3B-209ENST00000589949 IGHV3-48P01763 117 aa13.35□□□□□ -0.27
H3F3B-209ENST00000589949 IZUMO4Q1ZYL8 232 aa13.35□□□□□ -0.27
H3F3B-209ENST00000589949 SPSB3Q6PJ21 355 aa13.35□□□□□ -0.27
H3F3B-209ENST00000589949 UBAC2Q8NBM4 344 aa13.35□□□□□ -0.27
H3F3B-209ENST00000589949 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
H3F3B-209ENST00000589949 RABL2AQ9UBK7 228 aaPredicted RBP13.35□□□□□ -0.27
H3F3B-209ENST00000589949 EXTL2Q9UBQ6 330 aa13.35□□□□□ -0.27
H3F3B-209ENST00000589949 RABL2BQ9UNT1 228 aa13.35□□□□□ -0.27
H3F3B-209ENST00000589949 V9GYH0 126 aa13.35□□□□□ -0.27
H3F3B-209ENST00000589949 I3L2K1 104 aa13.34□□□□□ -0.27
H3F3B-209ENST00000589949 K7EMT4 169 aa13.34□□□□□ -0.27
H3F3B-209ENST00000589949 M0QYG6 137 aa13.34□□□□□ -0.27
H3F3B-209ENST00000589949 CYB5BO43169 146 aa13.34□□□□□ -0.27
H3F3B-209ENST00000589949 ATP6V0BQ99437 205 aa13.34□□□□□ -0.27
H3F3B-209ENST00000589949 ALMS1Q8TCU4 4167 aa13.33□□□□□ -0.27
H3F3B-209ENST00000589949 IGHV3-49A0A0A0MS15 119 aa13.33□□□□□ -0.28
H3F3B-209ENST00000589949 JTBO76095 146 aa13.33□□□□□ -0.28
H3F3B-209ENST00000589949 CTSDP07339 412 aaPredicted RBP13.33□□□□□ -0.28
H3F3B-209ENST00000589949 TSPAN5P62079 268 aa13.33□□□□□ -0.28
H3F3B-209ENST00000589949 Q56UQ5 140 aa13.33□□□□□ -0.28
H3F3B-209ENST00000589949 OR1P1Q8NH06 330 aa13.33□□□□□ -0.28
H3F3B-209ENST00000589949 MRGPRFQ96AM1 343 aa13.33□□□□□ -0.28
H3F3B-209ENST00000589949 TMEM56Q96MV1 263 aa13.33□□□□□ -0.28
H3F3B-209ENST00000589949 FAM212BQ9NTI7 297 aaPredicted RBP13.33□□□□□ -0.28
H3F3B-209ENST00000589949 SMPXQ9UHP9 88 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms