RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	FUT9	Q9Y231	359 aa		12.6	□□□□□ -0.39
DDX39A-209	ENST00000589318	MALRD1	Q5VYJ5	2156 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318		A0A1W2PN81	502 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	C20orf202	A1L168	122 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	C17orf98	A8MV24	154 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	SSSCA1	O60232	199 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	CLDN1	O95832	211 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	CD99	P14209	185 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	CHRNA7	P36544	502 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	GPR12	P47775	334 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	DLX6	P56179	175 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	SELENOT	P62341	195 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	OR5I1	Q13606	314 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	LEMD1	Q68G75	181 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	ODF3L1	Q8IXM7	274 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	TMEM37	Q8WXS4	190 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	GPR146	Q96CH1	333 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	ZNF714	Q96N38	554 aa		12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	PARD6G	Q9BYG4	376 aa	Predicted RBP	12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.59	□□□□□ -0.39
DDX39A-209	ENST00000589318		K7EP13	123 aa		12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	DUT	P33316	252 aa	Known RBP	12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	CDKN1A	P38936	164 aa		12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	CATR1	Q13166	79 aa		12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	RPL39P5	Q59GN2	51 aa		12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	SLC25A24	Q6NUK1	477 aa		12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318		Q6ZRM9	215 aa		12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	OR2D3	Q8NGH3	330 aa		12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	LSM10	Q969L4	123 aa	Known RBP	12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	HSD17B10	Q99714	261 aa	Known RBP	12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	SPOCK3	Q9BQ16	436 aa		12.58	□□□□□ -0.39
DDX39A-209	ENST00000589318	CEBPZOS	A8MTT3	80 aa		12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	MDK	P21741	143 aa	Predicted RBP	12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	RAB7A	P51149	207 aa		12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	TPPP2	P59282	170 aa		12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	RPL23	P62829	140 aa	Known RBP	12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	RBX1	P62877	108 aa		12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	IZUMO4	Q1ZYL8	232 aa		12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	TMEM155	Q4W5P6	130 aa		12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	PCGF1	Q9BSM1	259 aa		12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	DNAJC4	Q9NNZ3	241 aa		12.58	□□□□□ -0.4
DDX39A-209	ENST00000589318	TCF21	O43680	179 aa		12.57	□□□□□ -0.4
DDX39A-209	ENST00000589318	NDUFS7	O75251	213 aa		12.57	□□□□□ -0.4
DDX39A-209	ENST00000589318	ESD	P10768	282 aa		12.57	□□□□□ -0.4
DDX39A-209	ENST00000589318	SLC25A6	P12236	298 aa		12.57	□□□□□ -0.4
DDX39A-209	ENST00000589318	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.57	□□□□□ -0.4	1e-6	■■□□□ 12.1
DDX39A-209	ENST00000589318	AARD	Q4LEZ3	155 aa		12.57	□□□□□ -0.4
DDX39A-209	ENST00000589318	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.57	□□□□□ -0.4
DDX39A-209	ENST00000589318	SLC25A48	Q6ZT89	311 aa	Known RBP	12.57	□□□□□ -0.4
DDX39A-209	ENST00000589318	TCTEX1D1	Q8N7M0	179 aa		12.57	□□□□□ -0.4
DDX39A-209	ENST00000589318	SLC35E1	Q96K37	410 aa		12.57	□□□□□ -0.4
DDX39A-209	ENST00000589318	SAA2-SAA4	A0A096LPE2	208 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	S1PR2	O95136	353 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318		P0C879	139 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	SAA2	P0DJI9	122 aa	Predicted RBP	12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	RUNX1	Q01196	453 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	MEF2B	Q02080	365 aa	Predicted RBP	12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	TMEM41B	Q5BJD5	291 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	C11orf42	Q8N5U0	333 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	RAB40C	Q96S21	281 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	MAGT1	Q9H0U3	335 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	CHODL	Q9H9P2	273 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	RPRM	Q9NS64	109 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	ZNRD1	Q9P1U0	126 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	RFNG	Q9Y644	331 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	AKAP6	Q13023	2319 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318		M0R1X1	148 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	BPIFB3	P59826	476 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	OR4B1	Q8NGF8	309 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	VAMP8	Q9BV40	100 aa		12.56	□□□□□ -0.4
DDX39A-209	ENST00000589318	CST7	O76096	145 aa		12.55	□□□□□ -0.4
DDX39A-209	ENST00000589318	GOSR1	O95249	250 aa		12.55	□□□□□ -0.4
DDX39A-209	ENST00000589318	PSMB3	P49720	205 aa		12.55	□□□□□ -0.4
DDX39A-209	ENST00000589318	GNB2	P62879	340 aa		12.55	□□□□□ -0.4
DDX39A-209	ENST00000589318	IGFBPL1	Q8WX77	278 aa		12.55	□□□□□ -0.4
DDX39A-209	ENST00000589318	DDB2	Q92466	427 aa		12.55	□□□□□ -0.4
DDX39A-209	ENST00000589318	MANBAL	Q9NQG1	85 aa		12.55	□□□□□ -0.4
DDX39A-209	ENST00000589318	PXMP4	Q9Y6I8	212 aa		12.55	□□□□□ -0.4
DDX39A-209	ENST00000589318	UTP20	O75691	2785 aa	Known RBP	12.55	□□□□□ -0.4
DDX39A-209	ENST00000589318	OVOL3	O00110	214 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	RAB29	O14966	203 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	RPL15	P61313	204 aa	Known RBP	12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	RPP30	P78346	268 aa	Known RBP	12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	TOMM20L	Q6UXN7	152 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	LYG1	Q8N1E2	194 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	CMTM2	Q8TAZ6	248 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	RAB1C	Q92928	201 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	CACNG5	Q9UF02	275 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	TRAPPC1	Q9Y5R8	145 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	G6PC	P35575	357 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	TMEM217	Q8N7C4	229 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	NEIL1	Q96FI4	390 aa	Predicted RBP	12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	TIMD4	Q96H15	378 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	TIMM9	Q9Y5J7	89 aa		12.54	□□□□□ -0.4
DDX39A-209	ENST00000589318	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	NXPH3	O95157	252 aa		12.53	□□□□□ -0.4
DDX39A-209	ENST00000589318	TMEM50A	O95807	157 aa		12.53	□□□□□ -0.4

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