RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 POLR2GP62487 172 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 VAMP2P63027 116 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 CFHR3Q02985 330 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 TMEM95Q3KNT9 176 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 ASPHD1Q5U4P2 390 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 TEX38Q6PEX7 206 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 SLC24A4Q8NFF2 622 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 OR10W1Q8NGF6 305 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 OR1P1Q8NH06 330 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 TMEM158Q8WZ71 300 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 NOL4LQ96MY1 436 aaPredicted RBP13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 THYN1Q9P016 225 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 RNF114Q9Y508 228 aa13.32□□□□□ -0.28
SCAMP4-211ENST00000588907 ELANEP08246 267 aa13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 AREGP15514 252 aa13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 RPL23AP62750 156 aaKnown RBP13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 FOXE3Q13461 319 aa13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 RAB32Q13637 225 aa13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 SPINK9Q5DT21 86 aa13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 OR4X2Q8NGF9 303 aa13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 SMIM8Q96KF7 97 aa13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 MAGT1Q9H0U3 335 aa13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 RCL1Q9Y2P8 373 aaKnown RBP13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 LSM5Q9Y4Y9 91 aaKnown RBP13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 F11RQ9Y624 299 aaKnown RBP13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 SETD2Q9BYW2 2564 aaPredicted RBP13.31□□□□□ -0.28
SCAMP4-211ENST00000588907 hCG_2014768A0A024R1R8 64 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 TSC22D2O75157 780 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 DEDDO75618 318 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 APELAP0DMC3 54 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 RIPPLY3P57055 190 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 RAB11AP62491 216 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 KLK9Q2XQG4 91 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 BSXQ3C1V8 233 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 C2orf83Q53S99 150 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 TMEM65Q6PI78 240 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 KLHDC1Q8N7A1 406 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 LINC00527Q9UJ94 153 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 KLK9Q9UKQ9 250 aa13.3□□□□□ -0.28
SCAMP4-211ENST00000588907 FAM223BA6NKX1 122 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 E5RGE8 158 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 MPC2O95563 127 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 IFNA10P01566 189 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 NPY1RP25929 384 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 PROK1P58294 105 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 SRSF2Q01130 221 aaKnown RBP13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 LRRC37A5PQ49AS3 106 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 FAM223AQ8IWN6 122 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 RNF152Q8N8N0 203 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 OR5T1Q8NG75 326 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 THAP6Q8TBB0 222 aa13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 STRAPQ9Y3F4 350 aaKnown RBP13.29□□□□□ -0.28
SCAMP4-211ENST00000588907 REG1AP05451 166 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 IAPPP10997 89 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 MDKP21741 143 aaPredicted RBP13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 PSMB8P28062 276 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 CD83Q01151 205 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 EXOSC2Q13868 293 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 KRTAP24-1Q3LI83 254 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 FAM209BQ5JX69 171 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 PRSS54Q6PEW0 395 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 AKAP14Q86UN6 197 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 NECAP1Q8NC96 275 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 OR2T35Q8NGX2 323 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 RNASEH2CQ8TDP1 164 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 USMG5Q96IX5 58 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 P2RX4Q99571 388 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 ZNF355PQ9NSJ1 428 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 PSENENQ9NZ42 101 aa13.28□□□□□ -0.28
SCAMP4-211ENST00000588907 A0A0G2JLM5 398 aa13.27□□□□□ -0.29
SCAMP4-211ENST00000588907 CCNKO75909 580 aa13.27□□□□□ -0.29
SCAMP4-211ENST00000588907 OR8U8P0C7N1 319 aa13.27□□□□□ -0.29
SCAMP4-211ENST00000588907 RNASE2P10153 161 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-211ENST00000588907 PVRIGQ6DKI7 326 aa13.27□□□□□ -0.29
SCAMP4-211ENST00000588907 OR5AU1Q8NGC0 362 aa13.27□□□□□ -0.29
SCAMP4-211ENST00000588907 WIPF2Q8TF74 440 aaPredicted RBP13.27□□□□□ -0.29
SCAMP4-211ENST00000588907 WFDC12Q8WWY7 111 aa13.27□□□□□ -0.29
SCAMP4-211ENST00000588907 LYRM2Q9NU23 88 aaPredicted RBP13.27□□□□□ -0.29
SCAMP4-211ENST00000588907 IGLV11-55A0A075B6I3 123 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 TRBV9A0A0B4J1U6 114 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 A0A1B0GVG6 124 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 RPS10-NUDT3A0A1W2PQS6 291 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 SOX15O60248 233 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 TRGV3P03979 118 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 PF4V1P10720 104 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 P2RY1P47900 373 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 SPANXN5Q5MJ07 72 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 C11orf87Q6NUJ2 197 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 SLC25A24Q6NUK1 477 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 ZNF329Q86UD4 541 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 STX12Q86Y82 276 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 TCTE3Q8IZS6 198 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 CXorf58Q96LI9 332 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 C19orf24Q9BVV8 132 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 SLC25A31Q9H0C2 315 aa13.26□□□□□ -0.29
SCAMP4-211ENST00000588907 IFNA4P05014 189 aa13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 LYL1P12980 280 aa13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 RAB9AP51151 201 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms