RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ATP5IP56385 69 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-209ENST00000588857 SSBP2P81877 361 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-209ENST00000588857 CLINT1Q14677 625 aa17.68■□□□□ 0.42
ATG4D-209ENST00000588857 IL17RELQ6ZVW7 336 aa17.68■□□□□ 0.42
ATG4D-209ENST00000588857 OR10P1Q8NGE3 313 aa17.68■□□□□ 0.42
ATG4D-209ENST00000588857 NSD1Q96L73 2696 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-209ENST00000588857 FGF16O43320 207 aa17.67■□□□□ 0.42
ATG4D-209ENST00000588857 HLA-DRB1P01911 266 aa17.67■□□□□ 0.42
ATG4D-209ENST00000588857 HNF1AP20823 631 aa17.67■□□□□ 0.42
ATG4D-209ENST00000588857 CX3CL1P78423 397 aa17.67■□□□□ 0.42
ATG4D-209ENST00000588857 WT1-ASQ06250 92 aa17.67■□□□□ 0.42
ATG4D-209ENST00000588857 HSD17B13Q7Z5P4 300 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-209ENST00000588857 CYTL1Q9NRR1 136 aa17.67■□□□□ 0.42
ATG4D-209ENST00000588857 BORCS7-ASMTA0A0B4J1R7 106 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 BTBD17A6NE02 478 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 INAFM1C9JVW0 142 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 JTBO76095 146 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 IFNA4P05014 189 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 IER3P46695 156 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 UBA52P62987 128 aaKnown RBP17.66■□□□□ 0.42
ATG4D-209ENST00000588857 ETV3LQ6ZN32 361 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 STPG2Q8N412 459 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 LILRB2Q8N423 598 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 C5orf56Q8N8D9 126 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 OR5R1Q8NH85 324 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 ABHD5Q8WTS1 349 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 SSMEM1Q8WWF3 244 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 ARPC1AQ92747 370 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 PINX1Q96BK5 328 aaKnown RBP17.66■□□□□ 0.42
ATG4D-209ENST00000588857 SRSF8Q9BRL6 282 aaKnown RBP17.66■□□□□ 0.42
ATG4D-209ENST00000588857 SONP18583 2426 aaKnown RBP17.66■□□□□ 0.42
ATG4D-209ENST00000588857 IGLC7A0M8Q6 106 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 DFFBO76075 338 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 SUB1P53999 127 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATG4D-209ENST00000588857 EIF5AP63241 154 aaKnown RBP17.66■□□□□ 0.42
ATG4D-209ENST00000588857 IFITM2Q01629 132 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 SLC38A11Q08AI6 406 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 ARL16Q0P5N6 197 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 RPL7L1Q6DKI1 246 aaKnown RBP17.66■□□□□ 0.42
ATG4D-209ENST00000588857 Q6YL49 198 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 HAPLN4Q86UW8 402 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 WFDC1Q9HC57 220 aa17.66■□□□□ 0.42
ATG4D-209ENST00000588857 ANK3Q12955 4377 aaKnown RBP17.65■□□□□ 0.42
ATG4D-209ENST00000588857 TEX22C9J3V5 150 aa17.65■□□□□ 0.42
ATG4D-209ENST00000588857 M0QZK8 103 aa17.65■□□□□ 0.42
ATG4D-209ENST00000588857 IGHV4-59P01825 116 aa17.65■□□□□ 0.42
ATG4D-209ENST00000588857 APELAP0DMC3 54 aa17.65■□□□□ 0.42
ATG4D-209ENST00000588857 TPT1P13693 172 aaKnown RBP17.65■□□□□ 0.42
ATG4D-209ENST00000588857 ZNF266Q14584 549 aa17.65■□□□□ 0.42
ATG4D-209ENST00000588857 BSXQ3C1V8 233 aa17.65■□□□□ 0.42
ATG4D-209ENST00000588857 C16orf82Q7Z2V1 217 aa17.65■□□□□ 0.42
ATG4D-209ENST00000588857 TMEM170AQ8WVE7 144 aa17.65■□□□□ 0.42
ATG4D-209ENST00000588857 ATP5SQ99766 215 aa17.65■□□□□ 0.42
ATG4D-209ENST00000588857 IGHV7-81A0A0B4J1V7 117 aa17.64■□□□□ 0.41
ATG4D-209ENST00000588857 PMS2P5A8MQ11 134 aa17.64■□□□□ 0.41
ATG4D-209ENST00000588857 REG1AP05451 166 aa17.64■□□□□ 0.41
ATG4D-209ENST00000588857 RNASE2P10153 161 aaKnown RBP17.64■□□□□ 0.41
ATG4D-209ENST00000588857 AREGP15514 252 aa17.64■□□□□ 0.41
ATG4D-209ENST00000588857 C2orf83Q53S99 150 aa17.64■□□□□ 0.41
ATG4D-209ENST00000588857 TEX261Q6UWH6 196 aa17.64■□□□□ 0.41
ATG4D-209ENST00000588857 STOML3Q8TAV4 291 aa17.64■□□□□ 0.41
ATG4D-209ENST00000588857 ST8SIA2Q92186 375 aa17.64■□□□□ 0.41
ATG4D-209ENST00000588857 ATP6V1FQ16864 119 aa17.63■□□□□ 0.41
ATG4D-209ENST00000588857 ZNF48Q96MX3 618 aaPredicted RBP17.63■□□□□ 0.41
ATG4D-209ENST00000588857 FAM103A1Q9BTL3 118 aaKnown RBP17.63■□□□□ 0.41
ATG4D-209ENST00000588857 PRDM13Q9H4Q3 707 aa17.63■□□□□ 0.41
ATG4D-209ENST00000588857 TUSC1Q2TAM9 212 aa17.62■□□□□ 0.41
ATG4D-209ENST00000588857 BAP18Q8IXM2 172 aa17.62■□□□□ 0.41
ATG4D-209ENST00000588857 UBAC2Q8NBM4 344 aa17.62■□□□□ 0.41
ATG4D-209ENST00000588857 P2RX4Q99571 388 aa17.62■□□□□ 0.41
ATG4D-209ENST00000588857 IFNA5P01569 189 aa17.62■□□□□ 0.41
ATG4D-209ENST00000588857 SLC25A24Q6NUK1 477 aa17.62■□□□□ 0.41
ATG4D-209ENST00000588857 HSPB9Q9BQS6 159 aa17.62■□□□□ 0.41
ATG4D-209ENST00000588857 TMEM160Q9NX00 188 aa17.62■□□□□ 0.41
ATG4D-209ENST00000588857 IFNA7P01567 189 aa17.61■□□□□ 0.41
ATG4D-209ENST00000588857 NDPQ00604 133 aa17.61■□□□□ 0.41
ATG4D-209ENST00000588857 ZNF114Q8NC26 417 aa17.61■□□□□ 0.41
ATG4D-209ENST00000588857 ZNF680Q8NEM1 530 aa17.61■□□□□ 0.41
ATG4D-209ENST00000588857 TMEM147Q9BVK8 224 aa17.61■□□□□ 0.41
ATG4D-209ENST00000588857 PARP11Q9NR21 331 aa17.61■□□□□ 0.41
ATG4D-209ENST00000588857 SH2D7A6NKC9 451 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-209ENST00000588857 CFDP00746 253 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-209ENST00000588857 AMY1AP04745 511 aa17.6■□□□□ 0.41
ATG4D-209ENST00000588857 KRTAP21-3Q3LHN1 58 aa17.6■□□□□ 0.41
ATG4D-209ENST00000588857 GGACTQ9BVM4 153 aa17.6■□□□□ 0.41
ATG4D-209ENST00000588857 TNFRSF19Q9NS68 423 aa17.6■□□□□ 0.41
ATG4D-209ENST00000588857 UQCC1Q9NVA1 299 aa17.6■□□□□ 0.41
ATG4D-209ENST00000588857 VPREB3Q9UKI3 123 aa17.6■□□□□ 0.41
ATG4D-209ENST00000588857 HOXA3O43365 443 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-209ENST00000588857 CRLF1O75462 422 aa17.59■□□□□ 0.41
ATG4D-209ENST00000588857 SCGB2A2Q13296 93 aa17.59■□□□□ 0.41
ATG4D-209ENST00000588857 RBMS3Q6XE24 437 aaKnown RBP17.59■□□□□ 0.41
ATG4D-209ENST00000588857 SIGLECL1Q8N7X8 197 aa17.59■□□□□ 0.41
ATG4D-209ENST00000588857 OR1P1Q8NH06 330 aa17.59■□□□□ 0.41
ATG4D-209ENST00000588857 RNASEH2CQ8TDP1 164 aaKnown RBP17.59■□□□□ 0.41
ATG4D-209ENST00000588857 PRSS46E5RG02 174 aa17.58■□□□□ 0.41
ATG4D-209ENST00000588857 DEFA4P12838 97 aa17.58■□□□□ 0.41
ATG4D-209ENST00000588857 DLK1P80370 383 aa17.58■□□□□ 0.41
ATG4D-209ENST00000588857 EXOSC2Q13868 293 aaKnown RBP17.58■□□□□ 0.41
ATG4D-209ENST00000588857 C9orf152Q5JTZ5 239 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms