RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 COL6A5A8TX70 2615 aa8.33□□□□□ -1.08
SMARCA4-213ENST00000587988 TRBV9A0A0B4J1U6 114 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 C5orf51A6NDU8 294 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 CEBPZOSA8MTT3 80 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 INS-IGF2F8WCM5 200 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 H3BUA1 57 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 GOSR2O14653 212 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 SIX6O95475 246 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 TRGV3P03979 118 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 TPPP2P59282 170 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 RPL23AP62750 156 aaKnown RBP8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 NSUN5P1Q3KNT7 163 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 KHDC1LQ5JSQ8 128 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 TMEM65Q6PI78 240 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 SHISA2Q6UWI4 295 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 HSD17B13Q7Z5P4 300 aaPredicted RBP8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 ZBTB8BQ8NAP8 495 aaPredicted RBP8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 WDR89Q96FK6 387 aaPredicted RBP8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 P2RX4Q99571 388 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 MAGT1Q9H0U3 335 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 GNB4Q9HAV0 340 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 GSKIPQ9P0R6 139 aa8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 F11RQ9Y624 299 aaKnown RBP8.32□□□□□ -1.08
SMARCA4-213ENST00000587988 IGLV11-55A0A075B6I3 123 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 SSNA1O43805 119 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 OR2J3O76001 311 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 BRI3O95415 125 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 RNASE2P10153 161 aaKnown RBP8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 DEFA4P12838 97 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 ERHP84090 104 aaKnown RBP8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 RHOGP84095 191 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 ID3Q02535 119 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 KLK9Q2XQG4 91 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 SLC25A24Q6NUK1 477 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 GSG1LQ6UXU4 331 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 NDUFA11Q86Y39 141 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 SPATA3Q8NHX4 192 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 C2orf50Q96LR7 162 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 OR5B12Q96R08 314 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 SLA2Q9H6Q3 261 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 ENY2Q9NPA8 101 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 HEYLQ9NQ87 328 aaPredicted RBP8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 ZFP57Q9NU63 452 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 KLK9Q9UKQ9 250 aa8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 TSSC4Q9Y5U2 329 aaPredicted RBP8.31□□□□□ -1.08
SMARCA4-213ENST00000587988 FAM90A26D6RGX4 464 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 SYNGR2O43760 224 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 NDUFB8O95169 186 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 SCGB1D2O95969 90 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 IGHV3-11P01762 117 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 MBPP02686 304 aaPredicted RBP8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 IAPPP10997 89 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 NKX2-1P43699 371 aaPredicted RBP8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 CDX1P47902 265 aaPredicted RBP8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 H2BFSP57053 126 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 POLR2GP62487 172 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 IL15RAQ13261 267 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 BSXQ3C1V8 233 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 MRPL41Q8IXM3 137 aaKnown RBP8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 ZNF114Q8NC26 417 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 DTD1Q8TEA8 209 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 UBE2E2Q96LR5 201 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 CACFD1Q9UGQ2 172 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 FBXL7Q9UJT9 491 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 S4R3C0 116 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
SMARCA4-213ENST00000587988 IGHV3-21A0A0B4J1V1 117 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 WRBO00258 174 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 IGHV3-23P01764 117 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 HIST1H1BP16401 226 aaKnown RBP8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 CXCL3P19876 107 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 SNCAP37840 140 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 FCN2Q15485 313 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 DEFB136Q30KP8 78 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 C15orf32Q32M92 178 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 PVRIGQ6DKI7 326 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 C8orf86Q6ZUL3 223 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 NECAP1Q8NC96 275 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 KLHL30-AS1Q8NEE0 82 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 OR11H7Q8NGC8 314 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 OR1P1Q8NH06 330 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 DUX3Q96PT4 197 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 HIPK2Q9H2X6 1198 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 MGAT4CQ9UBM8 478 aa8.29□□□□□ -1.08
SMARCA4-213ENST00000587988 MFSD2BA6NFX1 497 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 FAM223BA6NKX1 122 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 NUDT19A8MXV4 375 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 I3L521 148 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 K7EPK0 472 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 SSSCA1O60232 199 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 MED6O75586 246 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 TMEM50AO95807 157 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 HTR2BP41595 481 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 PAX9P55771 341 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 ATP5G2Q06055 141 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 RAB32Q13637 225 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 MLANAQ16655 118 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 C2orf83Q53S99 150 aa8.28□□□□□ -1.08
SMARCA4-213ENST00000587988 FAM223AQ8IWN6 122 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms