RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 SNX29P2Q8IUI4 249 aa13.99□□□□□ -0.17
TRIM47-205ENST00000587774 OR2C3Q8N628 320 aa13.99□□□□□ -0.17
TRIM47-205ENST00000587774 OR5B3Q8NH48 314 aa13.99□□□□□ -0.17
TRIM47-205ENST00000587774 SPAG8Q99932 426 aaPredicted RBP13.99□□□□□ -0.17
TRIM47-205ENST00000587774 OVOL2Q9BRP0 275 aa13.99□□□□□ -0.17
TRIM47-205ENST00000587774 FUNDC2Q9BWH2 189 aa13.99□□□□□ -0.17
TRIM47-205ENST00000587774 UBQLN2Q9UHD9 624 aa13.99□□□□□ -0.17
TRIM47-205ENST00000587774 NDUFA4O00483 81 aa13.98□□□□□ -0.17
TRIM47-205ENST00000587774 VBP1P61758 197 aa13.98□□□□□ -0.17
TRIM47-205ENST00000587774 TSPAN5P62079 268 aa13.98□□□□□ -0.17
TRIM47-205ENST00000587774 TBC1D26Q86UD7 250 aa13.98□□□□□ -0.17
TRIM47-205ENST00000587774 TMEM56Q96MV1 263 aa13.98□□□□□ -0.17
TRIM47-205ENST00000587774 ATP6V0BQ99437 205 aa13.98□□□□□ -0.17
TRIM47-205ENST00000587774 C20orf24Q9BUV8 137 aa13.98□□□□□ -0.17
TRIM47-205ENST00000587774 SCPEP1Q9HB40 452 aa13.98□□□□□ -0.17
TRIM47-205ENST00000587774 FKBP11Q9NYL4 201 aa13.98□□□□□ -0.17
TRIM47-205ENST00000587774 SMIM31A0A1B0GVY4 71 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 TSPAN4O14817 238 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 ZNF207O43670 478 aaKnown RBP13.97□□□□□ -0.17
TRIM47-205ENST00000587774 JTBO76095 146 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 IGKV1-39P01597 117 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 IGKV1D-39P04432 117 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 RCVRNP35243 200 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 Q56UQ5 140 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 ZNF414Q96IQ9 312 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 SEC22AQ96IW7 307 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 TSC22D3Q99576 134 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 FAM212BQ9NTI7 297 aaPredicted RBP13.97□□□□□ -0.17
TRIM47-205ENST00000587774 BIRC6Q9NR09 4857 aa13.97□□□□□ -0.17
TRIM47-205ENST00000587774 HPGDSO60760 199 aa13.96□□□□□ -0.17
TRIM47-205ENST00000587774 ELK1P19419 428 aa13.96□□□□□ -0.17
TRIM47-205ENST00000587774 S100GP29377 79 aa13.96□□□□□ -0.17
TRIM47-205ENST00000587774 ODF3L2Q3SX64 289 aa13.96□□□□□ -0.17
TRIM47-205ENST00000587774 LPCAT3Q6P1A2 487 aa13.96□□□□□ -0.17
TRIM47-205ENST00000587774 SLC38A6Q8IZM9 456 aa13.96□□□□□ -0.17
TRIM47-205ENST00000587774 OR1P1Q8NH06 330 aa13.96□□□□□ -0.17
TRIM47-205ENST00000587774 MRGPRFQ96AM1 343 aa13.96□□□□□ -0.17
TRIM47-205ENST00000587774 CMTM3Q96MX0 182 aa13.96□□□□□ -0.17
TRIM47-205ENST00000587774 AGRNO00468 2067 aa13.95□□□□□ -0.18
TRIM47-205ENST00000587774 C15orf62A8K5M9 175 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 K7EMT4 169 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 M0QYG6 137 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 CTSGP08311 255 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 UCP3P55916 312 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 RNASE12Q5GAN4 147 aaKnown RBP13.94□□□□□ -0.18
TRIM47-205ENST00000587774 LAMTOR1Q6IAA8 161 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 H2BFWTQ7Z2G1 175 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 ZNF114Q8NC26 417 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 OR4A16Q8NH70 328 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 MISP3Q96FF7 219 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 FRAS1Q86XX4 4008 aa13.94□□□□□ -0.18
TRIM47-205ENST00000587774 I3L2K1 104 aa13.93□□□□□ -0.18
TRIM47-205ENST00000587774 APOC4P55056 127 aa13.93□□□□□ -0.18
TRIM47-205ENST00000587774 PRCDQ00LT1 54 aa13.93□□□□□ -0.18
TRIM47-205ENST00000587774 DEFB135Q30KP9 77 aa13.93□□□□□ -0.18
TRIM47-205ENST00000587774 OR4C46A6NHA9 309 aa13.92□□□□□ -0.18
TRIM47-205ENST00000587774 NUPL2O15504 423 aaKnown RBP13.92□□□□□ -0.18
TRIM47-205ENST00000587774 IGHV3-48P01763 117 aa13.92□□□□□ -0.18
TRIM47-205ENST00000587774 CTSDP07339 412 aaPredicted RBP13.92□□□□□ -0.18
TRIM47-205ENST00000587774 RELQ04864 619 aaPredicted RBP13.92□□□□□ -0.18
TRIM47-205ENST00000587774 A0A0J9YWU9 116 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 MT-CO2P00403 227 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 PI3P19957 117 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 FCGR2BP31994 310 aaPredicted RBP13.91□□□□□ -0.18
TRIM47-205ENST00000587774 RORCP51449 518 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 MFAP4P55083 255 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 EWSR1Q01844 656 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRIM47-205ENST00000587774 IZUMO4Q1ZYL8 232 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 Q6ZWC4 215 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 WFDC3Q8IUB2 231 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 PINX1Q96BK5 328 aaKnown RBP13.91□□□□□ -0.18
TRIM47-205ENST00000587774 OR10C1Q96KK4 312 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 RNF2Q99496 336 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 KLK11Q9UBX7 282 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 SMPXQ9UHP9 88 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 TP53TG1Q9Y2A0 90 aa13.91□□□□□ -0.18
TRIM47-205ENST00000587774 IGHV3-49A0A0A0MS15 119 aa13.9□□□□□ -0.18
TRIM47-205ENST00000587774 IGHV7-4-1A0A0J9YVY3 117 aa13.9□□□□□ -0.18
TRIM47-205ENST00000587774 FAM25AB3EWG3 89 aa13.9□□□□□ -0.18
TRIM47-205ENST00000587774 FAM25CB3EWG5 89 aa13.9□□□□□ -0.18
TRIM47-205ENST00000587774 FAM25GB3EWG6 89 aa13.9□□□□□ -0.18
TRIM47-205ENST00000587774 SPRY2O43597 315 aa13.9□□□□□ -0.18
TRIM47-205ENST00000587774 RND3P61587 244 aa13.9□□□□□ -0.18
TRIM47-205ENST00000587774 HSPE1P61604 102 aaKnown RBP13.9□□□□□ -0.18
TRIM47-205ENST00000587774 LHFPL1Q86WI0 220 aa13.9□□□□□ -0.18
TRIM47-205ENST00000587774 NXF2Q9GZY0 626 aaKnown RBP13.9□□□□□ -0.18
TRIM47-205ENST00000587774 NAA50Q9GZZ1 169 aaKnown RBP13.9□□□□□ -0.18
TRIM47-205ENST00000587774 CHEK1O14757 476 aa13.89□□□□□ -0.19
TRIM47-205ENST00000587774 YIF1AO95070 293 aa13.89□□□□□ -0.19
TRIM47-205ENST00000587774 IGKV1-5P01602 117 aa13.89□□□□□ -0.19
TRIM47-205ENST00000587774 PGAM2P15259 253 aa13.89□□□□□ -0.19
TRIM47-205ENST00000587774 RPL35AP18077 110 aaKnown RBP13.89□□□□□ -0.19
TRIM47-205ENST00000587774 BMI1P35226 326 aa13.89□□□□□ -0.19
TRIM47-205ENST00000587774 PMS2P11Q13670 270 aa13.89□□□□□ -0.19
TRIM47-205ENST00000587774 RNASE10Q5GAN6 216 aaKnown RBP13.89□□□□□ -0.19
TRIM47-205ENST00000587774 MZT2AQ6P582 158 aa13.89□□□□□ -0.19
TRIM47-205ENST00000587774 LYG2Q86SG7 212 aa13.89□□□□□ -0.19
TRIM47-205ENST00000587774 TMEM116Q8NCL8 245 aa13.89□□□□□ -0.19
TRIM47-205ENST00000587774 ZNF486Q96H40 463 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms