RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NDUFA3O95167 84 aa15.86■□□□□ 0.13
TRIM47-204ENST00000587339 H2AFB1P0C5Y9 115 aa15.86■□□□□ 0.13
TRIM47-204ENST00000587339 ELLP55199 621 aaPredicted RBP15.86■□□□□ 0.13
TRIM47-204ENST00000587339 ARSJQ5FYB0 599 aaPredicted RBP15.86■□□□□ 0.13
TRIM47-204ENST00000587339 PSMG3-AS1Q96PY0 264 aa15.86■□□□□ 0.13
TRIM47-204ENST00000587339 VSIRQ9H7M9 311 aa15.86■□□□□ 0.13
TRIM47-204ENST00000587339 RPRMQ9NS64 109 aa15.86■□□□□ 0.13
TRIM47-204ENST00000587339 ANKRD17O75179 2603 aaKnown RBP15.86■□□□□ 0.13
TRIM47-204ENST00000587339 PTPN13Q12923 2485 aa15.86■□□□□ 0.13
TRIM47-204ENST00000587339 FCN1O00602 326 aa15.86■□□□□ 0.13
TRIM47-204ENST00000587339 SUB1P53999 127 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRIM47-204ENST00000587339 IGLC7A0M8Q6 106 aa15.85■□□□□ 0.13
TRIM47-204ENST00000587339 BRS3P32247 399 aa15.85■□□□□ 0.13
TRIM47-204ENST00000587339 EBI3Q14213 229 aa15.85■□□□□ 0.13
TRIM47-204ENST00000587339 POLQO75417 2590 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 TRAV40A0A0B4J280 105 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 KRBOX1C9JBD0 128 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 FNDC10F2Z333 226 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 FAM106CPP0CH98 169 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 AKR1C1Q04828 323 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 FBLN7Q53RD9 439 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 TMEM41BQ5BJD5 291 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 LRRC75A-AS1Q8N1F1 130 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 SRSF12Q8WXF0 261 aaKnown RBP15.84■□□□□ 0.13
TRIM47-204ENST00000587339 P2RX4Q99571 388 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 C7orf69Q9H7B7 122 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 HIF1ANQ9NWT6 349 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 IGHV1-69DA0A0B4J2H0 117 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 A0A1B0GV50 99 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 CNIH1O95406 144 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 IGHV1-69P01742 117 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 REG1AP05451 166 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 TMEM11P17152 192 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 TEPPQ6URK8 271 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 COMMD1Q8N668 190 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 Q8N6K4 173 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 SFT2D1Q8WV19 159 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 NARS2Q96I59 477 aaKnown RBP15.84■□□□□ 0.13
TRIM47-204ENST00000587339 LINC00052Q96N35 136 aa15.84■□□□□ 0.13
TRIM47-204ENST00000587339 MAP1AP78559 2803 aaPredicted RBP15.83■□□□□ 0.12
TRIM47-204ENST00000587339 NCBP2LA6PVI3 153 aaKnown RBP15.83■□□□□ 0.12
TRIM47-204ENST00000587339 ZP3P21754 424 aa15.83■□□□□ 0.12
TRIM47-204ENST00000587339 SSBP2P81877 361 aaPredicted RBP15.83■□□□□ 0.12
TRIM47-204ENST00000587339 C5orf64Q2M2E5 130 aa15.83■□□□□ 0.12
TRIM47-204ENST00000587339 FFAR4Q5NUL3 377 aa15.83■□□□□ 0.12
TRIM47-204ENST00000587339 ACSM6Q6P461 480 aa15.83■□□□□ 0.12
TRIM47-204ENST00000587339 LFNGQ8NES3 379 aa15.83■□□□□ 0.12
TRIM47-204ENST00000587339 BPIFCQ8NFQ6 507 aa15.83■□□□□ 0.12
TRIM47-204ENST00000587339 RNASEH2CQ8TDP1 164 aaKnown RBP15.83■□□□□ 0.12
TRIM47-204ENST00000587339 LSM4Q9Y4Z0 139 aaKnown RBP15.83■□□□□ 0.12
TRIM47-204ENST00000587339 IGHV3OR16-10A0A075B7F0 116 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 A0A096LNT2 108 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 TRAV20A0A0B4J274 112 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 MBP02144 154 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 APELAP0DMC3 54 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 AREGP15514 252 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 SRSF3P84103 164 aaKnown RBP15.82■□□□□ 0.12
TRIM47-204ENST00000587339 CD69Q07108 199 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 RUSC1-AS1Q66K80 236 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 MGST2Q99735 147 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 TEX22C9J3V5 150 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 GATA3P23771 443 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 CACNG8Q8WXS5 425 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 C1orf159Q96HA4 380 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 TMEM231Q9H6L2 316 aa15.82■□□□□ 0.12
TRIM47-204ENST00000587339 PLXNB1O43157 2135 aa15.81■□□□□ 0.12
TRIM47-204ENST00000587339 BTBD17A6NE02 478 aa15.81■□□□□ 0.12
TRIM47-204ENST00000587339 RAB2AP61019 212 aa15.81■□□□□ 0.12
TRIM47-204ENST00000587339 RAB31Q13636 194 aa15.81■□□□□ 0.12
TRIM47-204ENST00000587339 SPSB3Q6PJ21 355 aa15.81■□□□□ 0.12
TRIM47-204ENST00000587339 RPP25LQ8N5L8 163 aaKnown RBP15.81■□□□□ 0.12
TRIM47-204ENST00000587339 LINC01356Q8N9X3 169 aa15.81■□□□□ 0.12
TRIM47-204ENST00000587339 ZNF114Q8NC26 417 aa15.81■□□□□ 0.12
TRIM47-204ENST00000587339 RCC1LQ96I51 464 aaKnown RBP15.81■□□□□ 0.12
TRIM47-204ENST00000587339 TREM1Q9NP99 234 aa15.81■□□□□ 0.12
TRIM47-204ENST00000587339 FAM96BQ9Y3D0 163 aa15.81■□□□□ 0.12
TRIM47-204ENST00000587339 ABCA12Q86UK0 2595 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 SOX15O60248 233 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 HBE1P02100 147 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 GPX4P36969 197 aaPredicted RBP15.8■□□□□ 0.12
TRIM47-204ENST00000587339 OPRK1P41145 380 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 GAMTQ14353 236 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 MLANAQ16655 118 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 Q5PR19 223 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 FAM120AOSQ5T036 256 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 BRD3OSQ6XYD6 125 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 TMEM144Q7Z5S9 345 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 OR10G4Q8NGN3 311 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 OR10G9Q8NGN4 311 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 OR10G7Q8NGN6 311 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 SSMEM1Q8WWF3 244 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 GGTLC1Q9BX51 225 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 DOPEY2Q9Y3R5 2298 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 FXYD3Q14802 87 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 ZNF726P1Q15940 193 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 HIST2H2BCQ6DN03 193 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 SLC16A13Q7RTY0 426 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 SRSF8Q9BRL6 282 aaKnown RBP15.8■□□□□ 0.12
TRIM47-204ENST00000587339 KCNIP2Q9NS61 270 aa15.8■□□□□ 0.12
TRIM47-204ENST00000587339 C1RLQ9NZP8 487 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms