RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 FAM90A2PQ658T7 463 aa11.92□□□□□ -0.5
NPC1-205ENST00000587163 SFXN4Q6P4A7 337 aa11.92□□□□□ -0.5
NPC1-205ENST00000587163 GIMAP1Q8WWP7 306 aa11.92□□□□□ -0.5
NPC1-205ENST00000587163 LSM10Q969L4 123 aaKnown RBP11.92□□□□□ -0.5
NPC1-205ENST00000587163 SLC25A38Q96DW6 304 aa11.92□□□□□ -0.5
NPC1-205ENST00000587163 COMMD9Q9P000 198 aa11.92□□□□□ -0.5
NPC1-205ENST00000587163 OR51B2Q9Y5P1 312 aa11.92□□□□□ -0.5
NPC1-205ENST00000587163 IGHV3OR16-13A0A075B7E8 117 aa11.91□□□□□ -0.5
NPC1-205ENST00000587163 IGHV3-74A0A0B4J1X5 117 aa11.91□□□□□ -0.5
NPC1-205ENST00000587163 MARCH11A6NNE9 402 aa11.91□□□□□ -0.5
NPC1-205ENST00000587163 IGLL5B9A064 214 aa11.91□□□□□ -0.5
NPC1-205ENST00000587163 YIF1AO95070 293 aa11.91□□□□□ -0.5
NPC1-205ENST00000587163 CMC4P56277 68 aaPredicted RBP11.91□□□□□ -0.5
NPC1-205ENST00000587163 TPRA1Q86W33 373 aa11.91□□□□□ -0.5
NPC1-205ENST00000587163 OR10C1Q96KK4 312 aa11.91□□□□□ -0.5
NPC1-205ENST00000587163 DBX1A6NMT0 343 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 CA1P00915 261 aaPredicted RBP11.9□□□□□ -0.5
NPC1-205ENST00000587163 KRASP01116 189 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 CLEC2LP0C7M8 214 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 G6PCP35575 357 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 LPAR6P43657 344 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 TCTAP57738 103 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 ERVK-16P61578 105 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 OR5AP2Q8NGF4 316 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 FCAMRQ8WWV6 532 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 CNBD2Q96M20 576 aa11.9□□□□□ -0.5
NPC1-205ENST00000587163 DNAH6Q9C0G6 4158 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 TRAV14DV4A0A0A6YYC5 116 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 MEIS3P1A6NDR6 274 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 NUPL2O15504 423 aaKnown RBP11.89□□□□□ -0.51
NPC1-205ENST00000587163 MRPS14O60783 128 aaKnown RBP11.89□□□□□ -0.51
NPC1-205ENST00000587163 PGLYRP1O75594 196 aaPredicted RBP11.89□□□□□ -0.51
NPC1-205ENST00000587163 IGHV3-48P01763 117 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 RLN1P04808 185 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 F2RP25116 425 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 SDC2P34741 201 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 RELQ04864 619 aaPredicted RBP11.89□□□□□ -0.51
NPC1-205ENST00000587163 TMEM187Q14656 261 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 LEMD1Q68G75 181 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 LILRB2Q8N423 598 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 SLC25A46Q96AG3 418 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 DGCR14Q96DF8 476 aaKnown RBP11.89□□□□□ -0.51
NPC1-205ENST00000587163 AUNIPQ9H7T9 357 aa11.89□□□□□ -0.51
NPC1-205ENST00000587163 I3L2K1 104 aa11.88□□□□□ -0.51
NPC1-205ENST00000587163 APOHP02749 345 aaPredicted RBP11.88□□□□□ -0.51
NPC1-205ENST00000587163 MXD1Q05195 221 aa11.88□□□□□ -0.51
NPC1-205ENST00000587163 UBE2UQ5VVX9 321 aa11.88□□□□□ -0.51
NPC1-205ENST00000587163 TCF24Q7RTU0 167 aa11.88□□□□□ -0.51
NPC1-205ENST00000587163 FAM24BQ8N5W8 94 aa11.88□□□□□ -0.51
NPC1-205ENST00000587163 Q8NAQ8 132 aa11.88□□□□□ -0.51
NPC1-205ENST00000587163 OR1P1Q8NH06 330 aa11.88□□□□□ -0.51
NPC1-205ENST00000587163 CMTM3Q96MX0 182 aa11.88□□□□□ -0.51
NPC1-205ENST00000587163 NXF2Q9GZY0 626 aaKnown RBP11.88□□□□□ -0.51
NPC1-205ENST00000587163 RNF167Q9H6Y7 350 aa11.88□□□□□ -0.51
NPC1-205ENST00000587163 C15orf61A6NNL5 157 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 XRCC3O43542 346 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 SNAPC5O75971 98 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 GIG44P09565 113 aaPredicted RBP11.87□□□□□ -0.51
NPC1-205ENST00000587163 RBMY1A1P0DJD3 496 aaKnown RBP11.87□□□□□ -0.51
NPC1-205ENST00000587163 RBMY1CP0DJD4 496 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 PSMB9P28065 219 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 MFAP4P55083 255 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 DEFB131AP59861 70 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 HERV-K104P61576 105 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 RBMY1FQ15415 496 aaKnown RBP11.87□□□□□ -0.51
NPC1-205ENST00000587163 DHRS11Q6UWP2 260 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 CADM3Q8N126 398 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 ST8SIA2Q92186 375 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 MISP3Q96FF7 219 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 TMEM56Q96MV1 263 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 MS4A6AQ9H2W1 248 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 BLOC1S6Q9UL45 172 aa11.87□□□□□ -0.51
NPC1-205ENST00000587163 FAT2Q9NYQ8 4349 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 C11orf94C9JXX5 98 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 DFFBO76075 338 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 RFX2P48378 723 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 PAFAH1B2P68402 229 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 IDNKQ5T6J7 187 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 MOB3AQ96BX8 217 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 TXN2Q99757 166 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 TMEM14BQ9NUH8 114 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 EHFQ9NZC4 300 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 PRNDQ9UKY0 176 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 SSR3Q9UNL2 185 aa11.86□□□□□ -0.51
NPC1-205ENST00000587163 RYR1P21817 5038 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 A0A0A6YYH2 397 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 IGHV3-66A0A0C4DH42 116 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 A0A1B0GVY2 172 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 A6NJ64 397 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 MT-CO2P00403 227 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 CBX5P45973 191 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 SCAND1P57086 179 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 TOMM20LQ6UXN7 152 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 SPARTQ8N0X7 666 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 BORCS5Q969J3 196 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 ZNF2Q9BSG1 426 aaPredicted RBP11.85□□□□□ -0.51
NPC1-205ENST00000587163 HRH4Q9H3N8 390 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 VSIRQ9H7M9 311 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 DNAH2Q9P225 4427 aa11.85□□□□□ -0.51
NPC1-205ENST00000587163 IGHV4-28A0A0C4DH34 117 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms