RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 LCN2P80188 198 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 C2orf83Q53S99 150 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 HCP5Q6MZN7 132 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 Q6ZRG5 221 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 ZNF709Q8N972 641 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 SLC24A4Q8NFF2 622 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 MALSU1Q96EH3 234 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 SIRT7Q9NRC8 400 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 PLA2G2EQ9NZK7 142 aa8.36□□□□□ -1.07
LIG3-203ENST00000585370 A0A1W2PPI3 338 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 ACTL6BO94805 426 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 HBE1P02100 147 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 PAX8Q06710 450 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 PSG5Q15238 335 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 SPINK9Q5DT21 86 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 TMEM182Q6ZP80 229 aaPredicted RBP8.35□□□□□ -1.07
LIG3-203ENST00000585370 CACNG8Q8WXS5 425 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 SRSF8Q9BRL6 282 aaKnown RBP8.35□□□□□ -1.07
LIG3-203ENST00000585370 HINT2Q9BX68 163 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 SH3BGRL3Q9H299 93 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 HRH4Q9H3N8 390 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 NPVFQ9HCQ7 196 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 KCNIP2Q9NS61 270 aa8.35□□□□□ -1.07
LIG3-203ENST00000585370 TRAV1-1A0A0B4J248 108 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 RNASEK-C17orf49H0YIS7 233 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 RRHO14718 337 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 TIMM23O14925 209 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 SLC25A17O43808 307 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 MOSP00540 346 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 CA2P00918 260 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 SNRNP70P08621 437 aaKnown RBP8.34□□□□□ -1.07
LIG3-203ENST00000585370 MDKP21741 143 aaPredicted RBP8.34□□□□□ -1.07
LIG3-203ENST00000585370 ZP3P21754 424 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 FGF7P21781 194 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 GPX4P36969 197 aaPredicted RBP8.34□□□□□ -1.07
LIG3-203ENST00000585370 LOXL1Q08397 574 aaPredicted RBP8.34□□□□□ -1.07
LIG3-203ENST00000585370 RAB31Q13636 194 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 PRSS8Q16651 343 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 TMEM249Q2WGJ8 235 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 BSXQ3C1V8 233 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 PPP1R27Q86WC6 154 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 NPBQ8NG41 125 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 OR2T10Q8NGZ9 312 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 PBDC1Q9BVG4 233 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 SMDT1Q9H4I9 107 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 ZNF430Q9H8G1 570 aaPredicted RBP8.34□□□□□ -1.07
LIG3-203ENST00000585370 WDR83OSQ9Y284 106 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 SIGLEC9Q9Y336 463 aa8.34□□□□□ -1.07
LIG3-203ENST00000585370 IGHV3-72A0A0B4J1Y9 119 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 UBE2L5PA0A1B0GUS4 154 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 A0A1B0GW64 132 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 PRSS46E5RG02 174 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 VENTXO95231 258 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 H2AFB1P0C5Y9 115 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 GATA3P23771 443 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 BRS3P32247 399 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 RPL27AP46776 148 aaKnown RBP8.33□□□□□ -1.08
LIG3-203ENST00000585370 RUNX1Q01196 453 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 ZNF616Q08AN1 781 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 EBI3Q14213 229 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 PEA15Q15121 130 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 TMEM41BQ5BJD5 291 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 FAM213BQ8TBF2 198 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 RNASEH2CQ8TDP1 164 aaKnown RBP8.33□□□□□ -1.08
LIG3-203ENST00000585370 CFHR4Q92496 578 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 KIAA1456Q9P272 454 aa8.33□□□□□ -1.08
LIG3-203ENST00000585370 METTL1Q9UBP6 276 aaKnown RBP8.33□□□□□ -1.08
LIG3-203ENST00000585370 IGHV4-61A0A0C4DH41 118 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 B4DSR2 109 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 NDUFA3O95167 84 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 FAM106CPP0CH98 169 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 RNASE2P10153 161 aaKnown RBP8.32□□□□□ -1.08
LIG3-203ENST00000585370 DLX1P56177 255 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 KLRD1Q13241 179 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 ACOT6Q3I5F7 207 aaPredicted RBP8.32□□□□□ -1.08
LIG3-203ENST00000585370 TOR2AQ5JU69 321 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 ETFRF1Q6IPR1 90 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 MBD3L1Q8WWY6 194 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 TMEM158Q8WZ71 300 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 RBMXL1Q96E39 390 aaKnown RBP8.32□□□□□ -1.08
LIG3-203ENST00000585370 C1orf159Q96HA4 380 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 TBX15Q96SF7 602 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 RSG1Q9BU20 258 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 NPCDR1Q9BY65 106 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 C1RLQ9NZP8 487 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 HILPDAQ9Y5L2 63 aa8.32□□□□□ -1.08
LIG3-203ENST00000585370 TRAV20A0A0B4J274 112 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 FAM157AC9JC47 383 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 CORTO00230 105 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 NBR2O15453 112 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 CYB5BO43169 146 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 IGHV4-31P0DP07 118 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 OPRK1P41145 380 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 PMS2P11Q13670 270 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 PLGLAQ15195 96 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 SSX2Q16385 188 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 LDLRAD2Q5SZI1 272 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 TEPPQ6URK8 271 aa8.31□□□□□ -1.08
LIG3-203ENST00000585370 TREML4Q6UXN2 200 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms