RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 C15orf62A8K5M9 175 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 NPIPB5A8MRT5 1133 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 OR13C7P0DN81 318 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 HKR1P10072 659 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 RNASE2P10153 161 aaKnown RBP12.71□□□□□ -0.37
SS18-226ENST00000585241 AREGP15514 252 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 CTRB1P17538 263 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 KLK9Q2XQG4 91 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 C2orf83Q53S99 150 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 CTRB2Q6GPI1 263 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 Q6ZS46 218 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 SLC35E3Q7Z769 313 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 TTC9CQ8N5M4 171 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 TMEM252Q8N6L7 170 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 PRSS22Q9GZN4 317 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 PARP11Q9NR21 331 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 KLK9Q9UKQ9 250 aa12.71□□□□□ -0.37
SS18-226ENST00000585241 IGSF23A1L1A6 192 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 FAM24AA6NFZ4 105 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 H3BP45 60 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 BOLA2-SMG1P6H3BVE0 249 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 TRIM77I1YAP6 450 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 NPY1RP25929 384 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 RPP30P78346 268 aaKnown RBP12.7□□□□□ -0.38
SS18-226ENST00000585241 ZNF345Q14585 488 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 AKIRIN2Q53H80 203 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 SPANXN5Q5MJ07 72 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 STPG2Q8N412 459 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 ABHD5Q8WTS1 349 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 P2RX4Q99571 388 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 SLC25A31Q9H0C2 315 aa12.7□□□□□ -0.38
SS18-226ENST00000585241 STRAPQ9Y3F4 350 aaKnown RBP12.7□□□□□ -0.38
SS18-226ENST00000585241 PMS2P5A8MQ11 134 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 AP4M1O00189 453 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 ARPC5O15511 151 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 TSPAN9O75954 239 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 SCAF4O95104 1147 aaKnown RBP12.69□□□□□ -0.38
SS18-226ENST00000585241 RPL12P30050 165 aaKnown RBP12.69□□□□□ -0.38
SS18-226ENST00000585241 CAV2P51636 162 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 BAXQ07812 192 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 OR2F1Q13607 317 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 C9orf152Q5JTZ5 239 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 ACOT7LQ6ZUV0 252 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 LFNGQ8NES3 379 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 OR1P1Q8NH06 330 aa12.69□□□□□ -0.38
SS18-226ENST00000585241 FAM110DQ8TAY7 271 aaPredicted RBP12.69□□□□□ -0.38
SS18-226ENST00000585241 F11RQ9Y624 299 aaKnown RBP12.69□□□□□ -0.38
SS18-226ENST00000585241 FAM181BA6NEQ2 426 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 TCF21O43680 179 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 FBXO24O75426 580 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 IFNA10P01566 189 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 HNRNPCP07910 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
SS18-226ENST00000585241 SNCAP37840 140 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 SULT1A1P50225 295 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 EWSR1Q01844 656 aaKnown RBP eCLIP12.68□□□□□ -0.38
SS18-226ENST00000585241 TMEM267Q0VDI3 215 aaPredicted RBP12.68□□□□□ -0.38
SS18-226ENST00000585241 UNQ5815/PRO19632Q6UWF5 114 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 INO80EQ8NBZ0 244 aaPredicted RBP12.68□□□□□ -0.38
SS18-226ENST00000585241 OR1L6Q8NGR2 347 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 MFFQ9GZY8 342 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 HSPB11Q9Y547 144 aa12.68□□□□□ -0.38
SS18-226ENST00000585241 TRAV41A0A0B4J266 112 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 PRSS46E5RG02 174 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 BRI3O95415 125 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 REG1AP05451 166 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 APELAP0DMC3 54 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 CXCL2P19875 107 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 PPIFP30405 207 aaKnown RBP12.67□□□□□ -0.38
SS18-226ENST00000585241 NUP62P37198 522 aaPredicted RBP12.67□□□□□ -0.38
SS18-226ENST00000585241 SUB1P53999 127 aaKnown RBP eCLIP12.67□□□□□ -0.38
SS18-226ENST00000585241 MFAP2P55001 183 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 RAB11AP62491 216 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 CFHR3Q02985 330 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 LAMTOR1Q6IAA8 161 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 HAPLN4Q86UW8 402 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 STX12Q86Y82 276 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 C9orf62Q8N4C0 152 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 KCNRGQ8N5I3 272 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 DMRT1Q9Y5R6 373 aa12.67□□□□□ -0.38
SS18-226ENST00000585241 G3V318 75 aa12.66□□□□□ -0.38
SS18-226ENST00000585241 OR8U8P0C7N1 319 aa12.66□□□□□ -0.38
SS18-226ENST00000585241 METTL15P1P0C7V9 234 aa12.66□□□□□ -0.38
SS18-226ENST00000585241 EIF2B2P49770 351 aaKnown RBP12.66□□□□□ -0.38
SS18-226ENST00000585241 ECSCRQ19T08 205 aa12.66□□□□□ -0.38
SS18-226ENST00000585241 LGALSLQ3ZCW2 172 aaPredicted RBP12.66□□□□□ -0.38
SS18-226ENST00000585241 Q6ZSV7 163 aa12.66□□□□□ -0.38
SS18-226ENST00000585241 RNASEH2CQ8TDP1 164 aaKnown RBP12.66□□□□□ -0.38
SS18-226ENST00000585241 WNT10AQ9GZT5 417 aa12.66□□□□□ -0.38
SS18-226ENST00000585241 IGLV11-55A0A075B6I3 123 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 A0A0D9SG52 128 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 H3BUA1 57 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 CORTO00230 105 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 NKX2-5P52952 324 aaPredicted RBP12.65□□□□□ -0.38
SS18-226ENST00000585241 NHLH2Q02577 135 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 ARL16Q0P5N6 197 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 ETV3LQ6ZN32 361 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 C19orf35Q6ZS72 473 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 FANCD2OSQ96PS1 177 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 C16orf95Q9H693 158 aa12.65□□□□□ -0.38
SS18-226ENST00000585241 SERTAD4Q9NUC0 356 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms