RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 NABP2Q9BQ15 211 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 PLEKHA3Q9HB20 300 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 GCM1Q9NP62 436 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ACTL6BO94805 426 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ESDP10768 282 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 PSG5Q15238 335 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 LRFN3Q9BTN0 628 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TMEM167BQ9NRX6 74 aa11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 POLR3KQ9Y2Y1 108 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-237ENST00000585163 IGKV1OR2-108A0A075B7D4 117 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 UPK2O00526 184 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 OR10J1P30954 320 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 LINC00310P59036 64 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 RPEL1Q2QD12 228 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MMD2Q8IY49 270 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 GAFA1Q96PS6 74 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 V9GYV3 84 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 KIR2DL5BA0A0G2JN68 375 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 KIR2DL5BA0A0G2JPC4 375 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 HELTA6NFD8 242 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 IGKV1-16P04430 117 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CT45A6P0DMU7 189 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CT45A5P0DMU8 189 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CT45A7P0DMV0 189 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 PAFAH1B2P68402 229 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 PIP4P1Q86T03 277 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 KIR2DL5AQ8N109 375 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 IL19Q9UHD0 177 aa11.6□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SVILO95425 2214 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SRRM4A7MD48 611 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MMP23AO75900 390 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CRISP2P16562 243 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 GNG4P50150 75 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ATP5IP56385 69 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 OR5I1Q13606 314 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 KRTCAP3Q53RY4 240 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SLC25A48Q6ZT89 311 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 MOB3BQ86TA1 216 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 OR1L6Q8NGR2 347 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 ZNF503Q96F45 646 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 SLC35E1Q96K37 410 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TMEM106BQ9NUM4 274 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TECRQ9NZ01 308 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TM4SF5O14894 197 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 OR10J4P0C629 311 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CRYBB3P26998 211 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 BMI1P35226 326 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 RTL8BQ17RB0 113 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 DEFB109BQ30KR1 87 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TMEM30BQ3MIR4 351 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 C2orf83Q53S99 150 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 PQLC2Q6ZP29 291 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 C1orf122Q6ZSJ8 110 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 DEFB108BQ8NET1 73 aa11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 RPUSD1Q9UJJ7 312 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-237ENST00000585163 TEX50A0A1B0GTY4 177 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 FCN1O00602 326 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 EREGO14944 169 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 IGHV1-46P01743 117 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 TPPP2P59282 170 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 TNFAIP6P98066 277 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 ZNF788Q6ZQV5 615 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 PNKDQ8N490 385 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 CCL13Q99616 98 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 C19orf24Q9BVV8 132 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 SLC35D1Q9NTN3 355 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 TNCP24821 2201 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 RAI1Q7Z5J4 1906 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 TRBV9A0A0B4J1U6 114 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 NDUFS8O00217 210 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 CEACAM4O75871 244 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 SERF1AO75920 110 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 FRMD6-AS1P0C7T7 363 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 FTH1P19P0C7X4 201 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 IER3P46695 156 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 NUTF2P61970 127 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 Q6ZWC4 215 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 FAM216BQ8N7L0 139 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 BET1LQ9NYM9 111 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 FAM215AQ9Y5M1 114 aa11.58□□□□□ -0.56
CDK5RAP3-237ENST00000585163 OR5G3P0C626 314 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 RANP62826 216 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 Q0VG73 95 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 OR8I2Q8N0Y5 310 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 RPRMLQ8N4K4 120 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 OR1L8Q8NGR8 309 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 OR5B3Q8NH48 314 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 GNB1LQ9BYB4 327 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 SNURFLB1AK76 121 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 GATA2P23769 480 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 SELENOVP59797 346 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 DEFB124Q8NES8 71 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 TBX15Q96SF7 602 aa11.57□□□□□ -0.56
CDK5RAP3-237ENST00000585163 GGTLC3B5MD39 225 aa11.56□□□□□ -0.56
CDK5RAP3-237ENST00000585163 OR7C2O60412 319 aa11.56□□□□□ -0.56
CDK5RAP3-237ENST00000585163 SAA1P0DJI8 122 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-237ENST00000585163 RNASE2P10153 161 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms