RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
CCDC47-206ENST00000584112 OR11H12B2RN74 326 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 TGOLN2O43493 480 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 CD7P09564 240 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 EDN2P20800 178 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 G6PCP35575 357 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 RORCP51449 518 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 ELLP55199 621 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-206ENST00000584112 WT1-ASQ06250 92 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 PHLDA2Q53GA4 152 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 SLC25A24Q6NUK1 477 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 SNX29P2Q8IUI4 249 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 LYSMD2Q8IV50 215 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 UXS1Q8NBZ7 420 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 OR5B3Q8NH48 314 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 CACNG8Q8WXS5 425 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 AP3S1Q92572 193 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 TMEM56Q96MV1 263 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 HINT2Q9BX68 163 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 SRD5A3Q9H8P0 318 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 MRPL27Q9P0M9 148 aaKnown RBP8.35□□□□□ -1.07
CCDC47-206ENST00000584112 MLXQ9UH92 298 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 PRNDQ9UKY0 176 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 UFC1Q9Y3C8 167 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 OR51B2Q9Y5P1 312 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 MYCBP2O75592 4640 aa8.35□□□□□ -1.07
CCDC47-206ENST00000584112 TRAV25A0A0B4J276 109 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 HPGDSO60760 199 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 ELK1P19419 428 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 UCP3P55916 312 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 ZNF585BQ52M93 769 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 SPSB3Q6PJ21 355 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 UNQ9165/PRO28630Q6UXU0 137 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 LINC00322Q6ZN03 302 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-206ENST00000584112 ZNF575Q86XF7 245 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 SLC38A6Q8IZM9 456 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 TMEM61Q8N0U2 210 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 DEFB125Q8N687 156 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 OR52B4Q8NGK2 314 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 BSCL2Q96G97 398 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-206ENST00000584112 ZNF436Q9C0F3 470 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-206ENST00000584112 TMEM14BQ9NUH8 114 aa8.34□□□□□ -1.07
CCDC47-206ENST00000584112 F11RQ9Y624 299 aaKnown RBP8.34□□□□□ -1.07
CCDC47-206ENST00000584112 C15orf61A6NNL5 157 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 FAM25AB3EWG3 89 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 FAM25CB3EWG5 89 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 FAM25GB3EWG6 89 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 C8orf88P0DMB2 117 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 TM4SF20Q53R12 229 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 BTNL8Q6UX41 500 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 RBPMS2Q6ZRY4 209 aaKnown RBP8.33□□□□□ -1.08
CCDC47-206ENST00000584112 H2BFWTQ7Z2G1 175 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 TBC1D26Q86UD7 250 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 OR4A16Q8NH70 328 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 TMEM190Q8WZ59 177 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 WFDC10AQ9H1F0 79 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 HIPK2Q9H2X6 1198 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 C21orf62Q9NYP8 219 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 NSG2Q9Y328 171 aa8.33□□□□□ -1.08
CCDC47-206ENST00000584112 IGHV3-35A0A0C4DH35 117 aa8.32□□□□□ -1.08
CCDC47-206ENST00000584112 OR2T8A6NH00 312 aa8.32□□□□□ -1.08
CCDC47-206ENST00000584112 SCAF4O95104 1147 aaKnown RBP8.32□□□□□ -1.08
CCDC47-206ENST00000584112 GABARAPO95166 117 aa8.32□□□□□ -1.08
CCDC47-206ENST00000584112 TBPP20226 339 aa8.32□□□□□ -1.08
CCDC47-206ENST00000584112 OR1P1Q8NH06 330 aa8.32□□□□□ -1.08
CCDC47-206ENST00000584112 C15orf40Q8WUR7 153 aa8.32□□□□□ -1.08
CCDC47-206ENST00000584112 ZNF486Q96H40 463 aaPredicted RBP8.32□□□□□ -1.08
CCDC47-206ENST00000584112 SEC22AQ96IW7 307 aa8.32□□□□□ -1.08
CCDC47-206ENST00000584112 RETNQ9HD89 108 aa8.32□□□□□ -1.08
CCDC47-206ENST00000584112 DAZ1Q9NQZ3 744 aaKnown RBP8.32□□□□□ -1.08
CCDC47-206ENST00000584112 M0QYG6 137 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 NDUFA4O00483 81 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 ZNF182P17025 639 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-206ENST00000584112 MFAP2P55001 183 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 RND3P61587 244 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 Q56UQ5 140 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 RNASE10Q5GAN6 216 aaKnown RBP8.31□□□□□ -1.08
CCDC47-206ENST00000584112 LAMTOR1Q6IAA8 161 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 ARRDC1Q8N5I2 433 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 UBAC2Q8NBM4 344 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 SCARB1Q8WTV0 552 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
CCDC47-206ENST00000584112 C5orf66Q9H5L9 145 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 SELENOKQ9Y6D0 94 aa8.31□□□□□ -1.08
CCDC47-206ENST00000584112 LOC102724200A0A096LPH7 203 aaPredicted RBP8.3□□□□□ -1.08
CCDC47-206ENST00000584112 IGHV3-21A0A0B4J1V1 117 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 K7EIM0 57 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 ATG12O94817 140 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 PGAM2P15259 253 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 PRCDQ00LT1 54 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 RELQ04864 619 aaPredicted RBP8.3□□□□□ -1.08
CCDC47-206ENST00000584112 CTF1Q16619 201 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 RNASE12Q5GAN4 147 aaKnown RBP8.3□□□□□ -1.08
CCDC47-206ENST00000584112 OR2C3Q8N628 320 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 ZNF114Q8NC26 417 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 MRGPRFQ96AM1 343 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 TXN2Q99757 166 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 FAM110AQ9BQ89 295 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 C20orf24Q9BUV8 137 aa8.3□□□□□ -1.08
CCDC47-206ENST00000584112 GGTLC1Q9BX51 225 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms