RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 LINC00052Q96N35 136 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 ZNF702PQ9H963 129 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 PARP11Q9NR21 331 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.66□□□□□ -1.02
TOP3A-216ENST00000583804 BET1LQ9NYM9 111 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 TET2Q6N021 2002 aaPredicted RBP8.65□□□□□ -1.02
TOP3A-216ENST00000583804 IGHV7-81A0A0B4J1V7 117 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 NUDT19A8MXV4 375 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 PITX3O75364 302 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 TSPAN9O75954 239 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 REG1AP05451 166 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 HKR1P10072 659 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 RPL8P62917 257 aaKnown RBP8.65□□□□□ -1.02
TOP3A-216ENST00000583804 VAMP2P63027 116 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 FXYD3Q14802 87 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 TMEM95Q3KNT9 176 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.02
TOP3A-216ENST00000583804 UQCC3Q6UW78 93 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 OR4F5Q8NH21 305 aa8.65□□□□□ -1.02
TOP3A-216ENST00000583804 FAM103A1Q9BTL3 118 aaKnown RBP8.65□□□□□ -1.02
TOP3A-216ENST00000583804 RAB19A4D1S5 217 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 E7EUB6 86 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 TAAR5O14804 337 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 NDUFA7O95182 113 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 IGHG2P01859 326 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 IL6RP08887 468 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-216ENST00000583804 MAS1LP35410 378 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 VDAC2P45880 294 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-216ENST00000583804 EIF5AP63241 154 aaKnown RBP8.64□□□□□ -1.03
TOP3A-216ENST00000583804 TNFRSF9Q07011 255 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 TMEM267Q0VDI3 215 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-216ENST00000583804 MRGPRG-AS1Q2M3A8 158 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 KRTAP24-1Q3LI83 254 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 C19orf35Q6ZS72 473 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 OR10W1Q8NGF6 305 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 ARPC1AQ92747 370 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 COMMD5Q9GZQ3 224 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 CYTL1Q9NRR1 136 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 LINC00527Q9UJ94 153 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 PRNDQ9UKY0 176 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 FOXA2Q9Y261 457 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-216ENST00000583804 TEX50A0A1B0GTY4 177 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 MSGN1A6NI15 193 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 ATP6V0E1O15342 81 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 DEDDO75618 318 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 SLC25A6P12236 298 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 COMPP49747 757 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-216ENST00000583804 CAV2P51636 162 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 NDPQ00604 133 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 BAP18Q8IXM2 172 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 Q8N2B8 174 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 LINC01006Q8NI28 216 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 NOL4LQ96MY1 436 aaPredicted RBP8.64□□□□□ -1.03
TOP3A-216ENST00000583804 C16orf95Q9H693 158 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 ZC4H2Q9NQZ6 224 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 TMEM14BQ9NUH8 114 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 FKBP11Q9NYL4 201 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 HSPB7Q9UBY9 170 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 WSB1Q9Y6I7 421 aa8.64□□□□□ -1.03
TOP3A-216ENST00000583804 A0A1B0GW64 132 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 FAM24AA6NFZ4 105 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 CGB1A6NKQ9 187 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 TEX46H3BTG2 121 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 AP4M1O00189 453 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 SYNGR2O43760 224 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 TMEM50AO95807 157 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 MDKP21741 143 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-216ENST00000583804 RPL27AP46776 148 aaKnown RBP8.63□□□□□ -1.03
TOP3A-216ENST00000583804 SSBP2P81877 361 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-216ENST00000583804 ID3Q02535 119 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 SPANXN5Q5MJ07 72 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 DTD1Q8TEA8 209 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 SRSF12Q8WXF0 261 aaKnown RBP8.63□□□□□ -1.03
TOP3A-216ENST00000583804 TMEM158Q8WZ71 300 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 BSCL2Q96G97 398 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-216ENST00000583804 C19orf24Q9BVV8 132 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 PLEKHA3Q9HB20 300 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 ENY2Q9NPA8 101 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 HEYLQ9NQ87 328 aaPredicted RBP8.63□□□□□ -1.03
TOP3A-216ENST00000583804 ZFP57Q9NU63 452 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 PSENENQ9NZ42 101 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 TMA7Q9Y2S6 64 aaKnown RBP8.63□□□□□ -1.03
TOP3A-216ENST00000583804 FBXO7Q9Y3I1 522 aa8.63□□□□□ -1.03
TOP3A-216ENST00000583804 CLPSL1A2RUU4 121 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 SCO1O75880 301 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 SPCS3P61009 180 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 HSPE1P61604 102 aaKnown RBP8.62□□□□□ -1.03
TOP3A-216ENST00000583804 FOXL1Q12952 345 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 ECSCRQ19T08 205 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 FAM74A1Q5RGS3 127 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 UNQ5815/PRO19632Q6UWF5 114 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 CENPVQ7Z7K6 275 aaPredicted RBP8.62□□□□□ -1.03
TOP3A-216ENST00000583804 LFNGQ8NES3 379 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 OR1L8Q8NGR8 309 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 SGMS2Q8NHU3 365 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 RNF141Q8WVD5 230 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 OR4C12Q96R67 309 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 SMIM3Q9BZL3 60 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 SERTAD4Q9NUC0 356 aa8.62□□□□□ -1.03
TOP3A-216ENST00000583804 COA4Q9NYJ1 87 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms