RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 OR5AC2Q9NZP5 309 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 ZNF580Q9UK33 172 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TENM1Q9UKZ4 2725 aa12.86□□□□□ -0.35
CDK5RAP3-228ENST00000583363 L7N2F9 121 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 AP4M1O00189 453 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 PFDN1O60925 122 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 CRYGCP07315 174 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 PET100P0DJ07 73 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 APELAP0DMC3 54 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 SLC25A4P12235 298 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 AREGP15514 252 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 PVALBP20472 110 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 VAMP2P63027 116 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 C19orf54Q5BKX5 351 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 MRPL41Q8IXM3 137 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 THAP6Q8TBB0 222 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 PSENENQ9NZ42 101 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 WSB1Q9Y6I7 421 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 U3KQ87 197 aa12.85□□□□□ -0.35
CDK5RAP3-228ENST00000583363 E5RGE8 158 aa12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 G3V318 75 aa12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 CTRB1P17538 263 aa12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 RPL23AP62750 156 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 CTRB2Q6GPI1 263 aa12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 UNQ5815/PRO19632Q6UWF5 114 aa12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 NOL4LQ96MY1 436 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 MBD2Q9UBB5 411 aa12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 LINC00527Q9UJ94 153 aa12.84□□□□□ -0.35
CDK5RAP3-228ENST00000583363 TRAV41A0A0B4J266 112 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 NPIPB5A8MRT5 1133 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 TSC22D2O75157 780 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 REG1AP05451 166 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 HTR2BP41595 481 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 P2RY1P47900 373 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 ATP5IP56385 69 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 RPP30P78346 268 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 ECSCRQ19T08 205 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 BSXQ3C1V8 233 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 TMEM95Q3KNT9 176 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 STPG2Q8N412 459 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 OR5T1Q8NG75 326 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 P2RX4Q99571 388 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 WNT10AQ9GZT5 417 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 C16orf95Q9H693 158 aa12.83□□□□□ -0.36
CDK5RAP3-228ENST00000583363 FAM24AA6NFZ4 105 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 NDUFA7O95182 113 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 IFNA10P01566 189 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 RNASE2P10153 161 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 PPIFP30405 207 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 SNCAP37840 140 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 SUB1P53999 127 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 C2orf83Q53S99 150 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 SPANXN5Q5MJ07 72 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 PVRIGQ6DKI7 326 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 TMEM65Q6PI78 240 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 C12orf54Q6X4T0 127 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 ZNF114Q8NC26 417 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 OR11H4Q8NGC9 324 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 FAM110DQ8TAY7 271 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 TMEM170AQ8WVE7 144 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 OR4C12Q96R67 309 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 SERTAD4Q9NUC0 356 aa12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 STRAPQ9Y3F4 350 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-228ENST00000583363 C15orf62A8K5M9 175 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 FBXO24O75426 580 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 C1QBP02746 253 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 CFHR3Q02985 330 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 KLK9Q2XQG4 91 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 ARSJQ5FYB0 599 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 TMEM14EPQ6UXP3 125 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 ZNF546Q86UE3 836 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 SLC24A4Q8NFF2 622 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 OR1P1Q8NH06 330 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 OR2T6Q8NHC8 308 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 DCUN1D4Q92564 292 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 LYRM2Q9NU23 88 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 KLK9Q9UKQ9 250 aa12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 F11RQ9Y624 299 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-228ENST00000583363 H3BP45 60 aa12.8□□□□□ -0.36
CDK5RAP3-228ENST00000583363 NPY1RP25929 384 aa12.8□□□□□ -0.36
CDK5RAP3-228ENST00000583363 MFAP2P55001 183 aa12.8□□□□□ -0.36
CDK5RAP3-228ENST00000583363 C19orf35Q6ZS72 473 aa12.8□□□□□ -0.36
CDK5RAP3-228ENST00000583363 NOXA1Q86UR1 476 aa12.8□□□□□ -0.36
CDK5RAP3-228ENST00000583363 TMEM252Q8N6L7 170 aa12.8□□□□□ -0.36
CDK5RAP3-228ENST00000583363 OR1L6Q8NGR2 347 aa12.8□□□□□ -0.36
CDK5RAP3-228ENST00000583363 GON7Q9BXV9 100 aa12.8□□□□□ -0.36
CDK5RAP3-228ENST00000583363 DMRT1Q9Y5R6 373 aa12.8□□□□□ -0.36
CDK5RAP3-228ENST00000583363 FXYD6-FXYD2A0A087WZ82 144 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 PMS2P5A8MQ11 134 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 HMSDA8MTL9 139 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 SOX15O60248 233 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 BRI3O95415 125 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 HKR1P10072 659 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 DEFA4P12838 97 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 CAV2P51636 162 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 RAB11AP62491 216 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 SLC25A24Q6NUK1 477 aa12.79□□□□□ -0.36
CDK5RAP3-228ENST00000583363 FANCD2OSQ96PS1 177 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms