RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 CD99P14209 185 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 SUB1P53999 127 aaKnown RBP eCLIP11.62□□□□□ -0.55
SENP3-208ENST00000583277 NHLH2Q02577 135 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 WT1-ASQ06250 92 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 TUSC1Q2TAM9 212 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 BSXQ3C1V8 233 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 C2orf83Q53S99 150 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 SLC51BQ86UW2 128 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 TMEM217Q8N7C4 229 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 ZNF114Q8NC26 417 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 PINX1Q96BK5 328 aaKnown RBP11.62□□□□□ -0.55
SENP3-208ENST00000583277 ZNF48Q96MX3 618 aaPredicted RBP11.62□□□□□ -0.55
SENP3-208ENST00000583277 GON7Q9BXV9 100 aa11.62□□□□□ -0.55
SENP3-208ENST00000583277 HIVEP1P15822 2718 aa11.61□□□□□ -0.55
SENP3-208ENST00000583277 DFFBO76075 338 aa11.61□□□□□ -0.55
SENP3-208ENST00000583277 EIF5AP63241 154 aaKnown RBP11.61□□□□□ -0.55
SENP3-208ENST00000583277 ZNF266Q14584 549 aa11.61□□□□□ -0.55
SENP3-208ENST00000583277 LILRB2Q8N423 598 aa11.61□□□□□ -0.55
SENP3-208ENST00000583277 TMEM86BQ8N661 226 aa11.61□□□□□ -0.55
SENP3-208ENST00000583277 OR10P1Q8NGE3 313 aa11.61□□□□□ -0.55
SENP3-208ENST00000583277 OR5C1Q8NGR4 320 aa11.61□□□□□ -0.55
SENP3-208ENST00000583277 ABHD5Q8WTS1 349 aa11.61□□□□□ -0.55
SENP3-208ENST00000583277 BORCS7-ASMTA0A0B4J1R7 106 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 JTBO76095 146 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 LY6G6DO95868 133 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 IFNA4P05014 189 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
SENP3-208ENST00000583277 UBA52P62987 128 aaKnown RBP11.6□□□□□ -0.55
SENP3-208ENST00000583277 NDPQ00604 133 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 OR8G2PQ6IF36 304 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 RBMS3Q6XE24 437 aaKnown RBP11.6□□□□□ -0.55
SENP3-208ENST00000583277 ETV3LQ6ZN32 361 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 STOML3Q8TAV4 291 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 ATP5SQ99766 215 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 ZNF471Q9BX82 626 aaPredicted RBP11.6□□□□□ -0.55
SENP3-208ENST00000583277 SMIM3Q9BZL3 60 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 CDC42EP3Q9UKI2 254 aa11.6□□□□□ -0.55
SENP3-208ENST00000583277 PMS2P5A8MQ11 134 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 AMY1AP04745 511 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 AREGP15514 252 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 CLINT1Q14677 625 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 ATP6V1FQ16864 119 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 CLEC9AQ6UXN8 241 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 HAPLN4Q86UW8 402 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 SIGLECL1Q8N7X8 197 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 BSCL2Q96G97 398 aaPredicted RBP11.59□□□□□ -0.55
SENP3-208ENST00000583277 HSPB9Q9BQS6 159 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 SLA2Q9H6Q3 261 aa11.59□□□□□ -0.55
SENP3-208ENST00000583277 NSD1Q96L73 2696 aaPredicted RBP11.59□□□□□ -0.55
SENP3-208ENST00000583277 HOXA3O43365 443 aaPredicted RBP11.58□□□□□ -0.55
SENP3-208ENST00000583277 TSPAN9O75954 239 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 TPT1P13693 172 aaKnown RBP11.58□□□□□ -0.55
SENP3-208ENST00000583277 UBAC2Q8NBM4 344 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 OR1L6Q8NGR2 347 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 OR1P1Q8NH06 330 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 SGMS2Q8NHU3 365 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 RNASEH2CQ8TDP1 164 aaKnown RBP11.58□□□□□ -0.55
SENP3-208ENST00000583277 TMEM170AQ8WVE7 144 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 TMEM68Q96MH6 324 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 P2RX4Q99571 388 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 SMR3AQ99954 134 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 GGACTQ9BVM4 153 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 PARP11Q9NR21 331 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 CYTL1Q9NRR1 136 aa11.58□□□□□ -0.55
SENP3-208ENST00000583277 ZFHX3Q15911 3703 aa11.58□□□□□ -0.56
SENP3-208ENST00000583277 ANK3Q12955 4377 aaKnown RBP11.58□□□□□ -0.56
SENP3-208ENST00000583277 NPIPB5A8MRT5 1133 aa11.58□□□□□ -0.56
SENP3-208ENST00000583277 CORTO00230 105 aa11.58□□□□□ -0.56
SENP3-208ENST00000583277 ARL16Q0P5N6 197 aa11.58□□□□□ -0.56
SENP3-208ENST00000583277 FAM103A1Q9BTL3 118 aaKnown RBP11.58□□□□□ -0.56
SENP3-208ENST00000583277 TMEM147Q9BVK8 224 aa11.58□□□□□ -0.56
SENP3-208ENST00000583277 F11RQ9Y624 299 aaKnown RBP11.58□□□□□ -0.56
SENP3-208ENST00000583277 PRSS46E5RG02 174 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 ATP6V0E1O15342 81 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 CYB5BO43169 146 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 IFNA5P01569 189 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 REG1AP05451 166 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 APELAP0DMC3 54 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 CTRB1P17538 263 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 SRD5A1P18405 259 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 DLK1P80370 383 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 RPL7L1Q6DKI1 246 aaKnown RBP11.57□□□□□ -0.56
SENP3-208ENST00000583277 PVRIGQ6DKI7 326 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 CTRB2Q6GPI1 263 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 ST8SIA2Q92186 375 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 WFDC1Q9HC57 220 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 UQCC1Q9NVA1 299 aa11.57□□□□□ -0.56
SENP3-208ENST00000583277 CYSRT1A8MQ03 144 aa11.56□□□□□ -0.56
SENP3-208ENST00000583277 FNDC10F2Z333 226 aa11.56□□□□□ -0.56
SENP3-208ENST00000583277 IGHG2P01859 326 aa11.56□□□□□ -0.56
SENP3-208ENST00000583277 CRYGCP07315 174 aa11.56□□□□□ -0.56
SENP3-208ENST00000583277 EGR2P11161 476 aaPredicted RBP11.56□□□□□ -0.56
SENP3-208ENST00000583277 CRIP2P52943 208 aaPredicted RBP11.56□□□□□ -0.56
SENP3-208ENST00000583277 VWC2Q2TAL6 325 aa11.56□□□□□ -0.56
SENP3-208ENST00000583277 SLC25A24Q6NUK1 477 aa11.56□□□□□ -0.56
SENP3-208ENST00000583277 TTC9CQ8N5M4 171 aa11.56□□□□□ -0.56
SENP3-208ENST00000583277 FBXO24O75426 580 aa11.55□□□□□ -0.56
SENP3-208ENST00000583277 DEFA4P12838 97 aa11.55□□□□□ -0.56
SENP3-208ENST00000583277 EXOSC2Q13868 293 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms