RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 NDUFA4L2Q9NRX3 87 aa11.79□□□□□ -0.52
SREBF1-221ENST00000583080 RHBDL2Q9NX52 303 aa11.79□□□□□ -0.52
SREBF1-221ENST00000583080 COMMD9Q9P000 198 aa11.79□□□□□ -0.52
SREBF1-221ENST00000583080 RRP15Q9Y3B9 282 aaKnown RBP11.79□□□□□ -0.52
SREBF1-221ENST00000583080 MARCH11A6NNE9 402 aa11.78□□□□□ -0.52
SREBF1-221ENST00000583080 FAM90A2PQ658T7 463 aa11.78□□□□□ -0.52
SREBF1-221ENST00000583080 HOGA1Q86XE5 327 aa11.78□□□□□ -0.52
SREBF1-221ENST00000583080 SLC25A38Q96DW6 304 aa11.78□□□□□ -0.52
SREBF1-221ENST00000583080 TRAV18A0A075B6X5 111 aa11.77□□□□□ -0.53
SREBF1-221ENST00000583080 NUPL2O15504 423 aaKnown RBP11.77□□□□□ -0.53
SREBF1-221ENST00000583080 XRCC3O43542 346 aa11.77□□□□□ -0.53
SREBF1-221ENST00000583080 TCTAP57738 103 aa11.77□□□□□ -0.53
SREBF1-221ENST00000583080 ERVK-16P61578 105 aa11.77□□□□□ -0.53
SREBF1-221ENST00000583080 SFXN4Q6P4A7 337 aa11.77□□□□□ -0.53
SREBF1-221ENST00000583080 Q8NAQ8 132 aa11.77□□□□□ -0.53
SREBF1-221ENST00000583080 OR5H6Q8NGV6 325 aa11.77□□□□□ -0.53
SREBF1-221ENST00000583080 OR10C1Q96KK4 312 aa11.77□□□□□ -0.53
SREBF1-221ENST00000583080 TXNL4BQ9NX01 149 aaKnown RBP11.77□□□□□ -0.53
SREBF1-221ENST00000583080 OR51B2Q9Y5P1 312 aa11.77□□□□□ -0.53
SREBF1-221ENST00000583080 DNAH17Q9UFH2 4485 aa11.76□□□□□ -0.53
SREBF1-221ENST00000583080 DYNC1H1Q14204 4646 aaKnown RBP11.76□□□□□ -0.53
SREBF1-221ENST00000583080 A0A1B0GVY2 172 aa11.76□□□□□ -0.53
SREBF1-221ENST00000583080 DBX1A6NMT0 343 aa11.76□□□□□ -0.53
SREBF1-221ENST00000583080 YIF1AO95070 293 aa11.76□□□□□ -0.53
SREBF1-221ENST00000583080 RLN1P04808 185 aa11.76□□□□□ -0.53
SREBF1-221ENST00000583080 RELQ04864 619 aaPredicted RBP11.76□□□□□ -0.53
SREBF1-221ENST00000583080 TMEM187Q14656 261 aa11.76□□□□□ -0.53
SREBF1-221ENST00000583080 LEMD1Q68G75 181 aa11.76□□□□□ -0.53
SREBF1-221ENST00000583080 FAM24BQ8N5W8 94 aa11.76□□□□□ -0.53
SREBF1-221ENST00000583080 MEIS3P1A6NDR6 274 aa11.75□□□□□ -0.53
SREBF1-221ENST00000583080 ANKRD65E5RJM6 399 aa11.75□□□□□ -0.53
SREBF1-221ENST00000583080 MRPS14O60783 128 aaKnown RBP11.75□□□□□ -0.53
SREBF1-221ENST00000583080 IGHV3-48P01763 117 aa11.75□□□□□ -0.53
SREBF1-221ENST00000583080 GNRHRP30968 328 aa11.75□□□□□ -0.53
SREBF1-221ENST00000583080 G6PCP35575 357 aa11.75□□□□□ -0.53
SREBF1-221ENST00000583080 CMC4P56277 68 aaPredicted RBP11.75□□□□□ -0.53
SREBF1-221ENST00000583080 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
SREBF1-221ENST00000583080 FCAMRQ8WWV6 532 aa11.75□□□□□ -0.53
SREBF1-221ENST00000583080 DNAH11Q96DT5 4516 aa11.75□□□□□ -0.53
SREBF1-221ENST00000583080 TRAV14DV4A0A0A6YYC5 116 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 C15orf61A6NNL5 157 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 I3L2K1 104 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 KRASP01116 189 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 CLEC2LP0C7M8 214 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 RBMY1A1P0DJD3 496 aaKnown RBP11.74□□□□□ -0.53
SREBF1-221ENST00000583080 RBMY1CP0DJD4 496 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 F2RP25116 425 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 FGF9P31371 208 aaPredicted RBP11.74□□□□□ -0.53
SREBF1-221ENST00000583080 LPAR6P43657 344 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 DEFB131AP59861 70 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 HERV-K104P61576 105 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 RBMY1FQ15415 496 aaKnown RBP11.74□□□□□ -0.53
SREBF1-221ENST00000583080 LILRB2Q8N423 598 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 GIMAP1Q8WWP7 306 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 ST8SIA2Q92186 375 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 SLC25A46Q96AG3 418 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 DGCR14Q96DF8 476 aaKnown RBP11.74□□□□□ -0.53
SREBF1-221ENST00000583080 MISP3Q96FF7 219 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 CNBD2Q96M20 576 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 CMTM3Q96MX0 182 aa11.74□□□□□ -0.53
SREBF1-221ENST00000583080 ABCA13Q86UQ4 5058 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 IGHV4-28A0A0C4DH34 117 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 IGHV3-66A0A0C4DH42 116 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 C11orf94C9JXX5 98 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 APOHP02749 345 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-221ENST00000583080 GIG44P09565 113 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-221ENST00000583080 HLA-DMBP28068 263 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 Q6ZTC4 211 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 TPRA1Q86W33 373 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 OR5AP2Q8NGF4 316 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 NXF2Q9GZY0 626 aaKnown RBP11.73□□□□□ -0.53
SREBF1-221ENST00000583080 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 HRH4Q9H3N8 390 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 AUNIPQ9H7T9 357 aa11.73□□□□□ -0.53
SREBF1-221ENST00000583080 IGHV4-4A0A075B6R2 117 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 PGLYRP1O75594 196 aaPredicted RBP11.72□□□□□ -0.53
SREBF1-221ENST00000583080 SNAPC5O75971 98 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 PSMB9P28065 219 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 SDC2P34741 201 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 MFAP4P55083 255 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 MXD1Q05195 221 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 LINC00336Q6ZUF6 198 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 TMEM56Q96MV1 263 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 FXYD6Q9H0Q3 95 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 RNF167Q9H6Y7 350 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 TMEM14BQ9NUH8 114 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 EHFQ9NZC4 300 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 PRNDQ9UKY0 176 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 BLOC1S6Q9UL45 172 aa11.72□□□□□ -0.53
SREBF1-221ENST00000583080 ST8SIA3O43173 380 aa11.71□□□□□ -0.53
SREBF1-221ENST00000583080 DFFBO76075 338 aa11.71□□□□□ -0.53
SREBF1-221ENST00000583080 MT-CO2P00403 227 aa11.71□□□□□ -0.53
SREBF1-221ENST00000583080 C4BPBP20851 252 aa11.71□□□□□ -0.53
SREBF1-221ENST00000583080 UBE2UQ5VVX9 321 aa11.71□□□□□ -0.53
SREBF1-221ENST00000583080 TOMM20LQ6UXN7 152 aa11.71□□□□□ -0.53
SREBF1-221ENST00000583080 MOB3AQ96BX8 217 aa11.71□□□□□ -0.53
SREBF1-221ENST00000583080 VSIRQ9H7M9 311 aa11.71□□□□□ -0.53
SREBF1-221ENST00000583080 AGRNO00468 2067 aa11.71□□□□□ -0.54
SREBF1-221ENST00000583080 ELOA3CA0A087WX78 387 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms