RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 TRBV6-7A0A0A0MS04 114 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 B9A039 149 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 GNG5P63218 68 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 GP6Q9HCN6 339 aa12.23□□□□□ -0.45
CSNK1D-217ENST00000581241 PCM1Q15154 2024 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 J3QRE1 110 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 TRGV3P03979 118 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 ORAOV1Q8WV07 137 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 SEMA5BQ9P283 1151 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 PILRBQ9UKJ0 227 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 RIPPLY3P57055 190 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 TMEM95Q3KNT9 176 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 FBXL7Q9UJT9 491 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 TAF1LQ8IZX4 1826 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 IGKV3-20P01619 116 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST3H2BBQ8N257 126 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 SIGMAR1Q99720 223 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 MRPL20Q9BYC9 149 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 TMEM242Q9NWH2 141 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 HOXA3O43365 443 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 C1QL4Q86Z23 238 aa12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 FOXD3Q9UJU5 478 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-217ENST00000581241 IGHV4-39P01824 125 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 PDLIM4P50479 330 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 SLC25A2Q9BXI2 301 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 FBXL15Q9H469 300 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 DPM2O94777 84 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 LINC00614P0C842 121 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 LOXL4Q96JB6 756 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 HIST1H2BLQ99880 126 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 ANAPC13Q9BS18 74 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 MEGF9Q9H1U4 602 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 FBLN5Q9UBX5 448 aa12.21□□□□□ -0.45
CSNK1D-217ENST00000581241 HBDP02042 147 aa12.21□□□□□ -0.46
CSNK1D-217ENST00000581241 NUDT10Q8NFP7 164 aa12.21□□□□□ -0.46
CSNK1D-217ENST00000581241 ARPC1AQ92747 370 aa12.21□□□□□ -0.46
CSNK1D-217ENST00000581241 NUDT11Q96G61 164 aa12.21□□□□□ -0.46
CSNK1D-217ENST00000581241 COL11A2P13942 1736 aaPredicted RBP12.21□□□□□ -0.46
CSNK1D-217ENST00000581241 LINC00271P0C7V0 271 aa12.21□□□□□ -0.46
CSNK1D-217ENST00000581241 NHP2Q9NX24 153 aaKnown RBP12.21□□□□□ -0.46
CSNK1D-217ENST00000581241 TRPM6Q9BX84 2022 aa12.21□□□□□ -0.46
CSNK1D-217ENST00000581241 A0A1B0GW64 132 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 IQCF6A8MYZ5 107 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 IGKV1D-33P01593 117 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 IGKV1-33P01594 117 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 C15orf61A6NNL5 157 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 UPK2O00526 184 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 FTH1P19P0C7X4 201 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 ZNF124Q15973 351 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 TMEM144Q7Z5S9 345 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 S4R3C0 116 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 CD5P06127 495 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 COX6B1P14854 86 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 PPP1R27Q86WC6 154 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 PLPPR1Q8TBJ4 325 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 SPSB2Q99619 263 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 C21orf62Q9NYP8 219 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 A6NNC1 897 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 GATA2P23769 480 aaPredicted RBP12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 CNTFRP26992 372 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 Q5PR19 223 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 SBF2Q86WG5 1849 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 CCL1P22362 96 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 CACNG7P62955 275 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 SRSF1Q07955 248 aaKnown RBP eCLIP12.2□□□□□ -0.466e-8■■■□□ 18.8
CSNK1D-217ENST00000581241 LYZL4Q96KX0 146 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 CFHR5Q9BXR6 569 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 PGPEP1Q9NXJ5 209 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 EPDR1Q9UM22 224 aa12.2□□□□□ -0.46
CSNK1D-217ENST00000581241 IGKCP01834 107 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 C1orf162Q8NEQ5 155 aaPredicted RBP12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 IGHV3-35A0A0C4DH35 117 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 H0YIZ8 118 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 TNFSF13O75888 250 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 APOBEC3AP31941 199 aaPredicted RBP12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 YAE1D1Q9NRH1 226 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 GLRXP35754 106 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 TMPRSS3P57727 454 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 ZNF497Q6ZNH5 498 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 DUX3Q96PT4 197 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 CHTOPQ9Y3Y2 248 aaKnown RBP12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 PATJQ8NI35 1801 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 COLCA2A8K830 154 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 ST20Q9HBF5 79 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 PARP14Q460N5 1801 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 FOXH1O75593 365 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 RFPL3SP0C7P2 107 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 COQ2Q96H96 371 aa12.19□□□□□ -0.46
CSNK1D-217ENST00000581241 IGHV3OR16-13A0A075B7E8 117 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 IGHV3-74A0A0B4J1X5 117 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 TRBV7-9A0A0J9YWB2 115 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 SAA1P0DJI8 122 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 ATP5L2Q7Z4Y8 100 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 DCTN5Q9BTE1 182 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 IGKV1D-13A0A0B4J2D9 117 aa12.18□□□□□ -0.46
CSNK1D-217ENST00000581241 TIAF1O95411 115 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms