RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 CCNKO75909 580 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 ATG12O94817 140 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 S1PR2O95136 353 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 HPRT1P00492 218 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 IFNA21P01568 189 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 IGKV1-39P01597 117 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 IGKV1D-39P04432 117 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 RRASP10301 218 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 HLA-GP17693 338 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 GGNBP1Q5YKI7 109 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 GSG1LQ6UXU4 331 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 LYZL2Q7Z4W2 148 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 SLC35G3Q8N808 338 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 RNASE11Q8TAA1 199 aaKnown RBP8.22□□□□□ -1.09
TOP3A-210ENST00000580713 TMED3Q9Y3Q3 217 aa8.22□□□□□ -1.09
TOP3A-210ENST00000580713 IGHV4OR15-8A0A075B7B6 117 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 A0A087WW49 117 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 C13orf42A0A1B0GVH6 325 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 C5orf51A6NDU8 294 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 H7C2Y5 167 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 SIX6O95475 246 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 CRYZL1O95825 349 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 CD1BP29016 333 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 PPIFP30405 207 aaKnown RBP8.21□□□□□ -1.1
TOP3A-210ENST00000580713 MC5RP33032 325 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 AKR1C2P52895 323 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 F2RL1P55085 397 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 PDPNQ86YL7 162 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 OR8H1Q8NGG4 311 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 OR5AN1Q8NGI8 311 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 GATAD1Q8WUU5 269 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 RRNAD1Q96FB5 475 aaKnown RBP8.21□□□□□ -1.1
TOP3A-210ENST00000580713 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 PDCD10Q9BUL8 212 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 ZNF436Q9C0F3 470 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-210ENST00000580713 PLEKHA2Q9HB19 425 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 PARP11Q9NR21 331 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 COMMD9Q9P000 198 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 WASHC3Q9Y3C0 194 aa8.21□□□□□ -1.1
TOP3A-210ENST00000580713 TRAV41A0A0B4J266 112 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 KRASP01116 189 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 IGLV1-51P01701 117 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 IGLV1-40P01703 118 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
TOP3A-210ENST00000580713 GIPP09681 153 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-210ENST00000580713 NQO2P16083 231 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 H2BFSP57053 126 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 ERVK-16P61578 105 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 TMEM177Q53S58 311 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 GTSCR1Q86UQ5 136 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 ASB13Q8WXK3 278 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 LSM10Q969L4 123 aaKnown RBP8.2□□□□□ -1.1
TOP3A-210ENST00000580713 FLYWCH2Q96CP2 140 aaKnown RBP8.2□□□□□ -1.1
TOP3A-210ENST00000580713 SEC22AQ96IW7 307 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 ST6GAL2Q96JF0 529 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 OR10C1Q96KK4 312 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 SPIN2AQ99865 258 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 SPIN2BQ9BPZ2 258 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 NEURL2Q9BR09 285 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 HIPK2Q9H2X6 1198 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 RANGRFQ9HD47 186 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-210ENST00000580713 ZNF580Q9UK33 172 aa8.2□□□□□ -1.1
TOP3A-210ENST00000580713 CXorf65A6NEN9 183 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 MARCH11A6NNE9 402 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 MPTX1A8MV57 137 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 SHOXO15266 292 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 ATP6V0E1O15342 81 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 OR2A4O95047 310 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 BRI3O95415 125 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 HRASP01112 189 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 IGKV1-5P01602 117 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 IGHV3-11P01762 117 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 IGKV1-16P04430 117 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 G6PCP35575 357 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 RAP2BP61225 183 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 RPS16P62249 146 aaKnown RBP8.19□□□□□ -1.1
TOP3A-210ENST00000580713 CYCSP99999 105 aaKnown RBP8.19□□□□□ -1.1
TOP3A-210ENST00000580713 PMS2P11Q13670 270 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 MMDQ15546 238 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 IAH1Q2TAA2 248 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-210ENST00000580713 NMSQ5H8A3 153 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 THOC7Q6I9Y2 204 aaKnown RBP8.19□□□□□ -1.1
TOP3A-210ENST00000580713 H2BFWTQ7Z2G1 175 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 FAM219AQ8IW50 185 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 RPP25LQ8N5L8 163 aaKnown RBP8.19□□□□□ -1.1
TOP3A-210ENST00000580713 DMBX1Q8NFW5 382 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 OSR1Q8TAX0 266 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-210ENST00000580713 C2orf50Q96LR7 162 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 OR2A7Q96R45 310 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 AIFM2Q9BRQ8 373 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 NMES1Q9C002 83 aa8.19□□□□□ -1.1
TOP3A-210ENST00000580713 A0A0G2JRQ6 117 aa8.18□□□□□ -1.1
TOP3A-210ENST00000580713 A0A1W2PN81 502 aa8.18□□□□□ -1.1
TOP3A-210ENST00000580713 HSPB1P04792 205 aaKnown RBP8.18□□□□□ -1.1
TOP3A-210ENST00000580713 CHRNA7P36544 502 aa8.18□□□□□ -1.1
TOP3A-210ENST00000580713 POU2AF1Q16633 256 aa8.18□□□□□ -1.1
TOP3A-210ENST00000580713 ECSCRQ19T08 205 aa8.18□□□□□ -1.1
TOP3A-210ENST00000580713 SSX9Q7RTT3 188 aa8.18□□□□□ -1.1
TOP3A-210ENST00000580713 TCTE3Q8IZS6 198 aa8.18□□□□□ -1.1
TOP3A-210ENST00000580713 ZBTB8BQ8NAP8 495 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms