RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 NBR2O15453 112 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 ACTL6BO94805 426 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 MOSP00540 346 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 REG1AP05451 166 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 COMPP49747 757 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 ERHP84090 104 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 PLGLAQ15195 96 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 CENPVQ7Z7K6 275 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 BPIFCQ8NFQ6 507 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 FAM96BQ9Y3D0 163 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 IGHV3OR16-10A0A075B7F0 116 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 IGLC7A0M8Q6 106 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 APELAP0DMC3 54 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 OR13C7P0DN81 318 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SLC25A16P16260 332 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 RAB2AP61019 212 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SERF2P84101 59 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 RUSC1-AS1Q66K80 236 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 HIST2H2BCQ6DN03 193 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SPSB3Q6PJ21 355 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 SSX7Q7RTT5 188 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 C1orf159Q96HA4 380 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 ABCA1O95477 2261 aa11.85□□□□□ -0.51
CDK5RAP3-218ENST00000580391 ZFHX3Q15911 3703 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 NAV2Q8IVL1 2488 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 A0A096LNT2 108 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TRAV40A0A0B4J280 105 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 NPFFO15130 113 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 NDUFA3O95167 84 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 MSMBP08118 114 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 ZNF726P1Q15940 193 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 TMEM41BQ5BJD5 291 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 UQCC3Q6UW78 93 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 OR2T10Q8NGZ9 312 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 NARS2Q96I59 477 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 P2RX4Q99571 388 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 MGST2Q99735 147 aa11.84□□□□□ -0.51
CDK5RAP3-218ENST00000580391 EIF3GO75821 320 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 H2AFB1P0C5Y9 115 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 AREGP15514 252 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MAS1LP35410 378 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 FFAR4Q5NUL3 377 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 DPPA3Q6W0C5 159 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 C19orf35Q6ZS72 473 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 NPBQ8NG41 125 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MALSU1Q96EH3 234 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 KIAA1456Q9P272 454 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 TEX22C9J3V5 150 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 CCL20P78556 96 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 Q8N6K4 173 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 ZNF709Q8N972 641 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 SRSF12Q8WXF0 261 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 RCC1LQ96I51 464 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 GGTLC1Q9BX51 225 aa11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 LSM4Q9Y4Z0 139 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-218ENST00000580391 KRBOX1C9JBD0 128 aa11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 DEFA4P12838 97 aa11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 ATP5IP56385 69 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 EBI3Q14213 229 aa11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MLANAQ16655 118 aa11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 FAM120AOSQ5T036 256 aa11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 SFT2D1Q8WV19 159 aa11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 NPVFQ9HCQ7 196 aa11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 TREM1Q9NP99 234 aa11.82□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MPDU1O75352 247 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 CD69Q07108 199 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 C5orf64Q2M2E5 130 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 DEFB113Q30KQ7 82 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 BRD3OSQ6XYD6 125 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 RPP25LQ8N5L8 163 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 SCRT1Q9BWW7 348 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 ZANQ9Y493 2812 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 IGHV1-69DA0A0B4J2H0 117 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 B4DSR2 109 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 FNDC10F2Z333 226 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 IGHV1-69P01742 117 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 IGHV4-38-2P0DP08 117 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 TMEM11P17152 192 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 ADCYAP1P18509 176 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MIC13Q5XKP0 118 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 LCN15Q6UWW0 184 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 SLC16A13Q7RTY0 426 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MAPK1IP1LQ8NDC0 245 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 LFNGQ8NES3 379 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 FNDC4Q9H6D8 234 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 SLC25A22Q9H936 323 aa11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 BEX4Q9NWD9 120 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-218ENST00000580391 C9JQL5 133 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MFAP2P55001 183 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 GAMTQ14353 236 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 GUK1Q16774 197 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 GCSAMLQ5JQS6 135 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 TEPPQ6URK8 271 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 COMMD1Q8N668 190 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 SSMEM1Q8WWF3 244 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 PSMG3-AS1Q96PY0 264 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 HIF1ANQ9NWT6 349 aa11.8□□□□□ -0.52
CDK5RAP3-218ENST00000580391 IGKV1OR2-108A0A075B7D4 117 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms