RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 GAGE10A6NGK3 116 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 K7ERU9 68 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 TIMP3P35625 211 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 NUTF2P61970 127 aaKnown RBP11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 IL15RAQ13261 267 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 TMEM97Q5BJF2 176 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 SPATA31B1PQ5VZV4 182 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 Q6ZT83 130 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 EAF1Q96JC9 268 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 EREGO14944 169 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 ANOS1P23352 680 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 LINC00305Q7Z4B0 112 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 COL4A3Q01955 1670 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 ALPK3Q96L96 1907 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 LNP1A1A4G5 178 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 A6NDN8 102 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 FAM90A27PA6NNH2 459 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 PRR33A8MZF0 331 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 FAM216BQ8N7L0 139 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 KCNS1Q96KK3 526 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 PRDM6Q9NQX0 595 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 LAMTOR2Q9Y2Q5 125 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 FRMPD3Q5JV73 1810 aa11.36□□□□□ -0.59
TRAPPC8-207ENST00000580104 EFNB3Q15768 340 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 RSPO1Q2MKA7 263 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 ACSF3Q4G176 576 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 PMCHL2Q9BQD1 86 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 C12orf54Q6X4T0 127 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 GOLT1AQ6ZVE7 132 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 PLA2G2EQ9NZK7 142 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 NUDT3O95989 172 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 TREML4Q6UXN2 200 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 TMEM116Q8NCL8 245 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 SNRNP40Q96DI7 357 aaKnown RBP11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 TMEM70Q9BUB7 260 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 MED13LQ71F56 2210 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 OR4C46A6NHA9 309 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
TRAPPC8-207ENST00000580104 IFNL4K9M1U5 179 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 SFXN3Q9BWM7 321 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 MUC21A0A0G2JKD1 596 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 MUC21A0A140T8X8 626 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 M0R296 226 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 MUC21Q5SSG8 566 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 SEPSECSQ9HD40 501 aaKnown RBP11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 KLF2Q9Y5W3 355 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 INTS1Q8N201 2190 aaKnown RBP11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 PAX9P55771 341 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 IFI27L2Q9H2X8 130 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 FOXF2Q12947 444 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 TBR1Q16650 682 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 WDR82Q6UXN9 313 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
TRAPPC8-207ENST00000580104 IGKV3-7A0A075B6H7 116 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 GNG5P63218 68 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 LHFPL4Q7Z7J7 247 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 HIGD1CA8MV81 97 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 PYYP10082 97 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 DUTP33316 252 aaKnown RBP11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 HBBP68871 147 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 TWIST1Q15672 202 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 THYN1Q9P016 225 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 ACTL10Q5JWF8 245 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 GGTLC1Q9BX51 225 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 PRDM13Q9H4Q3 707 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 THADAQ6YHU6 1953 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 C16orf97H3BN30 126 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 HLA-DRB1P01911 266 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 MORN2Q502X0 79 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
TRAPPC8-207ENST00000580104 SAA2-SAA4A0A096LPE2 208 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 IQCF6A8MYZ5 107 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 PEX7O00628 323 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 FOXH1O75593 365 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 SAA2P0DJI9 122 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 HOXA4Q00056 320 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 FAM53AQ6NSI3 398 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 METRNQ9UJH8 293 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 ZFP30Q9Y2G7 519 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 IGHV3-35A0A0C4DH35 117 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 A8MWP6 167 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 SCGB1C2P0DMR2 95 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 SELLP14151 372 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 TCF24Q7RTU0 167 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 OR4C13Q8NGP0 309 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 OR9G1Q8NH87 305 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 LINC00473A8K010 186 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 J3QW42 95 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 NBEAP1P0C6P0 100 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 FCGR2BP31994 310 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 PRB3Q04118 309 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 ASCL4Q6XD76 172 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 FDCSPQ8NFU4 85 aa11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 ZNF324O75467 553 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC8-207ENST00000580104 CKS2P33552 79 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms