RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 RIPPLY3P57055 190 aa12.43□□□□□ -0.42
CSNK1D-212ENST00000580061 RAB32Q13637 225 aa12.43□□□□□ -0.42
CSNK1D-212ENST00000580061 AWAT1Q58HT5 328 aa12.43□□□□□ -0.42
CSNK1D-212ENST00000580061 ZNF114Q8NC26 417 aa12.43□□□□□ -0.42
CSNK1D-212ENST00000580061 OR5AU1Q8NGC0 362 aa12.43□□□□□ -0.42
CSNK1D-212ENST00000580061 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-212ENST00000580061 F11RQ9Y624 299 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-212ENST00000580061 hCG_2014768A0A024R1R8 64 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 H3BUA1 57 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 SSSCA1O60232 199 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 BRI3O95415 125 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 IAPPP10997 89 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 PSMB8P28062 276 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 BSXQ3C1V8 233 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 TEX38Q6PEX7 206 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 COMMD1Q8N668 190 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 CHAC2Q8WUX2 184 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 PPP1R1CQ8WVI7 109 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 ASB13Q8WXK3 278 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 CIB3Q96Q77 187 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 P2RX4Q99571 388 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 ZFP57Q9NU63 452 aa12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 LSM5Q9Y4Y9 91 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-212ENST00000580061 LY86O95711 162 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 PRH1P02810 166 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 ELANEP08246 267 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 GIPP09681 153 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 RNASE2P10153 161 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 PF4V1P10720 104 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 DEFA4P12838 97 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 SNCAP37840 140 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 HTR2BP41595 481 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 PAX9P55771 341 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 S100A10P60903 97 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 FOXE3Q13461 319 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 KLK9Q2XQG4 91 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 RNF152Q8N8N0 203 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 SLC24A4Q8NFF2 622 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 OR1P1Q8NH06 330 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 FANCD2OSQ96PS1 177 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 RAB40CQ96S21 281 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 KLK15Q9H2R5 256 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 ZNF355PQ9NSJ1 428 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 KLK9Q9UKQ9 250 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 DMRT1Q9Y5R6 373 aa12.41□□□□□ -0.42
CSNK1D-212ENST00000580061 IGLV11-55A0A075B6I3 123 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 TMEM50AO95807 157 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 MFAP2P55001 183 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 KRTAP10-3P60369 221 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 LRRC37A5PQ49AS3 106 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 PVRIGQ6DKI7 326 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 OR4X2Q8NGF9 303 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 OR1L6Q8NGR2 347 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 WFDC12Q8WWY7 111 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 SMIM8Q96KF7 97 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 MS4A10Q96PG2 267 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 SLA2Q9H6Q3 261 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 U3KQ87 197 aa12.4□□□□□ -0.42
CSNK1D-212ENST00000580061 TRBV9A0A0B4J1U6 114 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 DEDDO75618 318 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 MPC2O95563 127 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 HIST1H1BP16401 226 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 NPY1RP25929 384 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 RAB9AP51151 201 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 SUB1P53999 127 aaKnown RBP eCLIP12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 TAS2R30P59541 319 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 RAP2BP61225 183 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 C2orf83Q53S99 150 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 TCTEX1D4Q5JR98 221 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 SLC25A24Q6NUK1 477 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 TMEM65Q6PI78 240 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 LCNL1Q6ZST4 164 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 PSENENQ9NZ42 101 aa12.39□□□□□ -0.43
CSNK1D-212ENST00000580061 H0YIZ8 118 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 H3BP45 60 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 L7N2F9 121 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 CYB5BO43169 146 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 OR2J3O76001 311 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 IFNA10P01566 189 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 TRGV3P03979 118 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 RPLP1P05386 114 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 CD28P10747 220 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 PVALBP20472 110 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 BCAP31P51572 246 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 ATP5IP56385 69 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 TPPP2P59282 170 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 VAMP2P63027 116 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 CD83Q01151 205 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 MYOZ3Q8TDC0 251 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 OR5AC2Q9NZP5 309 aa12.38□□□□□ -0.43
CSNK1D-212ENST00000580061 TRAV14DV4A0A0A6YYC5 116 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 C15orf62A8K5M9 175 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 TSC22D2O75157 780 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 RLN2P04090 185 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 RPL23AP62750 156 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 RPP30P78346 268 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 RHOGP84095 191 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 DEFA5Q01523 94 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms