RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 RPL32P62910 135 aaKnown RBP4.38□□□□□ -1.71
NF1-219ENST00000579081 PRSS53Q2L4Q9 553 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 ATP5EP2Q5VTU8 51 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 VN1R4Q7Z5H5 301 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 GATAD1Q8WUU5 269 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 QTRT1Q9BXR0 403 aaKnown RBP4.38□□□□□ -1.71
NF1-219ENST00000579081 WDR54Q9H977 334 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 CEP250Q9BV73 2442 aa4.38□□□□□ -1.71
NF1-219ENST00000579081 TGFAP01135 160 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 FGF12P61328 243 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 ZNF146Q15072 292 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 CLDND2Q8NHS1 167 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 RHOVQ96L33 236 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 USF3Q68DE3 2245 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 ZNF414Q96IQ9 312 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 SRSF8Q9BRL6 282 aaKnown RBP4.37□□□□□ -1.71
NF1-219ENST00000579081 SHANK3Q9BYB0 1731 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 IGKV3D-20A0A0C4DH25 116 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 IGHV3-66A0A0C4DH42 116 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 PROB1E7EW31 1015 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 FGF16O43320 207 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 IGHV3-23P01764 117 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 CRYBB3P26998 211 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 PCOLCEQ15113 449 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 TIMM23BQ5SRD1 257 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 UTF1Q5T230 341 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 NRTNQ99748 197 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 TRAV12-3A0A0B4J271 114 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 ZNF415Q09FC8 603 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 C1orf194Q5T5A4 169 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 TMEM252Q8N6L7 170 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 OR11H4Q8NGC9 324 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 WNT2BQ93097 391 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 ZNF385AQ96PM9 386 aaKnown RBP4.37□□□□□ -1.71
NF1-219ENST00000579081 FOXD3Q9UJU5 478 aaPredicted RBP4.37□□□□□ -1.71
NF1-219ENST00000579081 JPT1Q9UK76 154 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 F8VVB4 439 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 F8VWA3 439 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 UNC119Q13432 240 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 Q6ZS49 121 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 SLC25A48Q6ZT89 311 aaKnown RBP4.37□□□□□ -1.71
NF1-219ENST00000579081 IGLV3-16A0A075B6K0 115 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 TRGV4A0A0C4DH28 118 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 PSCAO43653 123 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 UPK3AO75631 287 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 APOMO95445 188 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 CISD3P0C7P0 127 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 LYL1P12980 280 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 PAX1P15863 534 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 PSG4Q00888 419 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 PAX2Q02962 417 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 ZNF385CQ66K41 422 aaPredicted RBP4.37□□□□□ -1.71
NF1-219ENST00000579081 ZNF826PQ6ZT77 177 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 OR13A1Q8NGR1 328 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 ASPDHA6ND91 283 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 LEPP41159 167 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 CYB561D1Q8N8Q1 229 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 TAF15Q92804 592 aaKnown RBP eCLIP4.37□□□□□ -1.71
NF1-219ENST00000579081 DNAJC30Q96LL9 226 aa4.37□□□□□ -1.71
NF1-219ENST00000579081 HOXB3P14651 431 aaPredicted RBP4.36□□□□□ -1.71
NF1-219ENST00000579081 CDKN1BP46527 198 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 TMEM258P61165 79 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 NPIPB3Q92617 1050 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 C18orf15Q96N68 181 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 CST9LQ9H4G1 147 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 TRBV5-3A0A0A0MS03 114 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 IGHV3-49A0A0A0MS15 119 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 WNT2P09544 360 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 LINC01465Q8N7H1 131 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 GLMPQ8WWB7 406 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 DUSP15Q9H1R2 295 aaPredicted RBP4.36□□□□□ -1.71
NF1-219ENST00000579081 ZSWIM8A7E2V4 1837 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 A0A0J9YW62 118 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 B9A039 149 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 CDC42EP2O14613 210 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 TNFSF13O75888 250 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 NAPSAO96009 420 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 RNASE4P34096 147 aaKnown RBP4.36□□□□□ -1.71
NF1-219ENST00000579081 ICAM4Q14773 271 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 PEAR1Q5VY43 1037 aaPredicted RBP4.36□□□□□ -1.71
NF1-219ENST00000579081 TEX45Q8NA69 505 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 FBXL7Q9UJT9 491 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 ZIC3O60481 467 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 HLA-DRB4P13762 266 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 KIAA1644Q3SXP7 199 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 OXLD1Q5BKU9 147 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 FAM89BQ8N5H3 189 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 HLA-DRB4X5D2U9 266 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 NCKAP5O14513 1909 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 TRAV8-2A0A0B4J237 113 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 UCP1P25874 307 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 DEFB121Q5J5C9 76 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 WDR82Q6UXN9 313 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 TMEM86BQ8N661 226 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 FAM57AQ8TBR7 257 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 MRAPQ8TCY5 172 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 RAMP3O60896 148 aa4.36□□□□□ -1.71
NF1-219ENST00000579081 PGLYRP1O75594 196 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms