RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ACTL6BO94805 426 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 IGHV4-59P01825 116 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 METTL15P1P0C7V9 234 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 SAA1P0DJI8 122 aaPredicted RBP8.13□□□□□ -1.11
SS18-210ENST00000578700 RAB5CP51148 216 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 F2RL1P55085 397 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 ATP5IP56385 69 aaPredicted RBP8.13□□□□□ -1.11
SS18-210ENST00000578700 PROK1P58294 105 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 BPIFB3P59826 476 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 RPL8P62917 257 aaKnown RBP8.13□□□□□ -1.11
SS18-210ENST00000578700 BLOC1S1P78537 153 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 SLC38A11Q08AI6 406 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 TPTE2P1Q5T6R2 138 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 MINOS1Q5TGZ0 78 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 OR8G2PQ6IF36 304 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 TMEM86BQ8N661 226 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 HSD17B11Q8NBQ5 300 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 OR4P4Q8NGL7 312 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 RNF5Q99942 180 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 GINS3Q9BRX5 216 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 TMEM14BQ9NUH8 114 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 TCF19Q9Y242 345 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 MINOS1-NBL1R4GNA1 71 aa8.13□□□□□ -1.11
SS18-210ENST00000578700 A0A1W2PN81 502 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 ZNF705EA8MWA4 302 aaPredicted RBP8.12□□□□□ -1.11
SS18-210ENST00000578700 FBXO24O75426 580 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 PRH1P02810 166 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 CHRNA7P36544 502 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 SNCAP37840 140 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 SPINK9Q5DT21 86 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 FAM74A1Q5RGS3 127 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 TMEM14EPQ6UXP3 125 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 Q6ZSV7 163 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 COMMD7Q86VX2 200 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 PUSL1Q8N0Z8 303 aaKnown RBP8.12□□□□□ -1.11
SS18-210ENST00000578700 STPG2Q8N412 459 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 TMEM167AQ8TBQ9 72 aa8.12□□□□□ -1.11
SS18-210ENST00000578700 SAT2Q96F10 170 aaPredicted RBP8.12□□□□□ -1.11
SS18-210ENST00000578700 TBL2Q9Y4P3 447 aaKnown RBP8.12□□□□□ -1.11
SS18-210ENST00000578700 TET2Q6N021 2002 aaPredicted RBP8.12□□□□□ -1.11
SS18-210ENST00000578700 TENM3Q9P273 2699 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 TRAV3A0A0B4J244 114 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 A0A0U1RQK1 487 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 RPS10-NUDT3A0A1W2PQS6 291 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 NUDT19A8MXV4 375 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 ODF3BA8MYP8 253 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 UMAD1C9J7I0 102 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 LY6LH3BQJ8 138 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 IFNA4P05014 189 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 NMBP08949 121 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 CD1BP29016 333 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 MAS1LP35410 378 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 UBE2E1P51965 193 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 RPL15P61313 204 aaKnown RBP8.11□□□□□ -1.11
SS18-210ENST00000578700 ERHP84090 104 aaKnown RBP8.11□□□□□ -1.11
SS18-210ENST00000578700 PRCDQ00LT1 54 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 DIAPH2-AS1Q14236 149 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 PLGLAQ15195 96 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 BEAN1Q3B7T3 259 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 MMD2Q8IY49 270 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 ZNF709Q8N972 641 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 TEX45Q8NA69 505 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 OR1L8Q8NGR8 309 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 MRAPQ8TCY5 172 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 BSCL2Q96G97 398 aaPredicted RBP8.11□□□□□ -1.11
SS18-210ENST00000578700 CITED4Q96RK1 184 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 TBX15Q96SF7 602 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 TMEM147Q9BVK8 224 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 SIRPDQ9H106 197 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 ARV1Q9H2C2 271 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 WFDC1Q9HC57 220 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 UQCC1Q9NVA1 299 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 MED9Q9NWA0 146 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 PLA2G2EQ9NZK7 142 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 KIAA1456Q9P272 454 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 FAM96BQ9Y3D0 163 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
SS18-210ENST00000578700 IGHV3-72A0A0B4J1Y9 119 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 IGHV1-69DA0A0B4J2H0 117 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 TEX50A0A1B0GTY4 177 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 A0A1W2PRD5 423 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 A0A1W2PRF3 423 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 A0A1W2PRM7 423 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
SS18-210ENST00000578700 C17orf112F2Z3M2 114 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 SLC25A17O43808 307 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 IGHV1-69P01742 117 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 IL6RP08887 468 aaPredicted RBP8.1□□□□□ -1.11
SS18-210ENST00000578700 SPP1P10451 314 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 NPY1RP25929 384 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 BRS3P32247 399 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 IER3P46695 156 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 CAMLGP49069 296 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 SULT1A2P50226 295 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 SUB1P53999 127 aaKnown RBP eCLIP8.1□□□□□ -1.11
SS18-210ENST00000578700 RAB2AP61019 212 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 PRB3Q04118 309 aaPredicted RBP8.1□□□□□ -1.11
SS18-210ENST00000578700 ETV3LQ6ZN32 361 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 C11orf44Q8N8P7 122 aa8.1□□□□□ -1.11
SS18-210ENST00000578700 SLC24A4Q8NFF2 622 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms