RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 SNCAP37840 140 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 SUB1P53999 127 aaKnown RBP eCLIP8.93□□□□□ -0.98
ERBB2-208ENST00000578630 SPCS3P61009 180 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 WT1-ASQ06250 92 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 KLK9Q2XQG4 91 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 DEFB136Q30KP8 78 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 ZNF343Q6P1L6 599 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 Q6ZRM9 215 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 LYZL2Q7Z4W2 148 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 LRTM2Q8N967 370 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 CXorf58Q96LI9 332 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 DUX3Q96PT4 197 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 MCRIP2Q9BUT9 160 aaKnown RBP8.93□□□□□ -0.98
ERBB2-208ENST00000578630 PRR13Q9NZ81 148 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 PEF1Q9UBV8 284 aaKnown RBP8.93□□□□□ -0.98
ERBB2-208ENST00000578630 CACNG5Q9UF02 275 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 KLK9Q9UKQ9 250 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 TMED3Q9Y3Q3 217 aa8.93□□□□□ -0.98
ERBB2-208ENST00000578630 IGLV11-55A0A075B6I3 123 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 A0A0G2JRQ6 117 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 A0A1B0GU03 582 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 IFNA21P01568 189 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 HLA-AP01891 365 aaKnown RBP8.92□□□□□ -0.98
ERBB2-208ENST00000578630 H2AFB2P0C5Z0 115 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 ANXA7P20073 488 aaKnown RBP8.92□□□□□ -0.98
ERBB2-208ENST00000578630 ZP3P21754 424 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 SMCO1Q147U7 214 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 TATDN3Q17R31 274 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 C15orf32Q32M92 178 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 ETV3LQ6ZN32 361 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 LYG2Q86SG7 212 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 OR2C3Q8N628 320 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 LINC00482Q8N8I6 264 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 OR1P1Q8NH06 330 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 ENKURQ8TC29 256 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 EEF1AKMT3Q96AZ1 226 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 RCC1LQ96I51 464 aaKnown RBP8.92□□□□□ -0.98
ERBB2-208ENST00000578630 FANCD2OSQ96PS1 177 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 GPR61Q9BZJ8 451 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 C20orf85Q9H1P6 137 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 TBC1D24Q9ULP9 559 aa8.92□□□□□ -0.98
ERBB2-208ENST00000578630 F11RQ9Y624 299 aaKnown RBP8.92□□□□□ -0.98
ERBB2-208ENST00000578630 TRAV6A0A075B6T7 132 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 TRBV7-1A0A0A6YYK4 115 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 ANKRD34BA5PLL1 514 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 INS-IGF2F8WCM5 200 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 NDUFB8O95169 186 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 HOXB5P09067 269 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 SLC25A6P12236 298 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 HOXA1P49639 335 aaPredicted RBP8.91□□□□□ -0.98
ERBB2-208ENST00000578630 DHRS2Q13268 280 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 ANKRD55Q3KP44 614 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 AARDQ4LEZ3 155 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 OR1S1Q8NH92 325 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 HIPK2Q9H2X6 1198 aa8.91□□□□□ -0.98
ERBB2-208ENST00000578630 NOTCH3Q9UM47 2321 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 IGHV4OR15-8A0A075B7B6 117 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 A0A087WW49 117 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.9□□□□□ -0.98
ERBB2-208ENST00000578630 CEBPZOSA8MTT3 80 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 IFITM3Q01628 133 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 FHL3Q13643 280 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 EXOSC2Q13868 293 aaKnown RBP8.9□□□□□ -0.98
ERBB2-208ENST00000578630 SPINK9Q5DT21 86 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 NMSQ5H8A3 153 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 NOXA1Q86UR1 476 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 DUSP18Q8NEJ0 188 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 VN1R17PQ8TDU5 208 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 HEYLQ9NQ87 328 aaPredicted RBP8.9□□□□□ -0.98
ERBB2-208ENST00000578630 NUDT15Q9NV35 164 aa8.9□□□□□ -0.98
ERBB2-208ENST00000578630 CORTO00230 105 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 OVOL1O14753 267 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 MED6O75586 246 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 CLEC3BP05452 202 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 HTR2BP41595 481 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 DEFA5Q01523 94 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 RPEL1Q2QD12 228 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 PDLIM3Q53GG5 364 aaPredicted RBP8.89□□□□□ -0.99
ERBB2-208ENST00000578630 GGNBP1Q5YKI7 109 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 PLET1Q6UQ28 207 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 C19orf35Q6ZS72 473 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 ZNF114Q8NC26 417 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 MITD1Q8WV92 249 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 DCUN1D4Q92564 292 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 GAR1Q9NY12 217 aaKnown RBP8.89□□□□□ -0.99
ERBB2-208ENST00000578630 ZMAT5Q9UDW3 170 aaKnown RBP8.89□□□□□ -0.99
ERBB2-208ENST00000578630 MGAM2Q2M2H8 2515 aa8.89□□□□□ -0.99
ERBB2-208ENST00000578630 GGCTO75223 188 aaKnown RBP8.88□□□□□ -0.99
ERBB2-208ENST00000578630 IGLL1P15814 213 aa8.88□□□□□ -0.99
ERBB2-208ENST00000578630 HOXD3P31249 432 aaPredicted RBP8.88□□□□□ -0.99
ERBB2-208ENST00000578630 SLURP1P55000 103 aa8.88□□□□□ -0.99
ERBB2-208ENST00000578630 TNFRSF9Q07011 255 aa8.88□□□□□ -0.99
ERBB2-208ENST00000578630 CLEC19AQ6UXS0 136 aa8.88□□□□□ -0.99
ERBB2-208ENST00000578630 UXS1Q8NBZ7 420 aa8.88□□□□□ -0.99
ERBB2-208ENST00000578630 ZNF431Q8TF32 576 aaPredicted RBP8.88□□□□□ -0.99
ERBB2-208ENST00000578630 DLX4Q92988 240 aaPredicted RBP8.88□□□□□ -0.99
ERBB2-208ENST00000578630 MISP3Q96FF7 219 aa8.88□□□□□ -0.99
ERBB2-208ENST00000578630 ATP6V0BQ99437 205 aa8.88□□□□□ -0.99
ERBB2-208ENST00000578630 ELOVL1Q9BW60 279 aa8.88□□□□□ -0.99
ERBB2-208ENST00000578630 GPN1Q9HCN4 374 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms