RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 AKR1C2P52895 323 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 ELLP55199 621 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 SPCS3P61009 180 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 PRCDQ00LT1 54 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 RBMS2Q15434 407 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 C15orf32Q32M92 178 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 XP32Q5T750 250 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 C1QL4Q86Z23 238 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 VKORC1L1Q8N0U8 176 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 LGI3Q8N145 548 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 ZNF114Q8NC26 417 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 BSCL2Q96G97 398 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 RTBDNQ9BSG5 229 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 ALX4Q9H161 411 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 GNB4Q9HAV0 340 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 MCUBQ9NWR8 336 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 TECRQ9NZ01 308 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 SHPKQ9UHJ6 478 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 FBXL7Q9UJT9 491 aa6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 F11RQ9Y624 299 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-210ENST00000578557 MGAM2Q2M2H8 2515 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 IGLV11-55A0A075B6I3 123 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 A0A1B0GU03 582 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 IGLC7A0M8Q6 106 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 OR13C7P0DN81 318 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 MYOD1P15172 320 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 HOXD3P31249 432 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 BMI1P35226 326 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 CCR6P51684 374 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 RPP30P78346 268 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 EXOSC2Q13868 293 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 KLF9Q13886 244 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 LRTM2Q8N967 370 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 OR9G4Q8NGQ1 327 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 RNASE11Q8TAA1 199 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 GLYATL2Q8WU03 294 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 DCUN1D4Q92564 292 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 DLX4Q92988 240 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 CCDC32Q9BV29 185 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 C5orf66Q9H5L9 145 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 PLEKHA3Q9HB20 300 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 AKIP1Q9NQ31 210 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 V9GYH0 126 aa6.61□□□□□ -1.35
PPP4R1-210ENST00000578557 TRAV30A0A087WSZ9 112 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 RPS10-NUDT3A0A1W2PQS6 291 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 HMX3A6NHT5 357 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 FAM90A26D6RGX4 464 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 IFNA17P01571 189 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 NHLRC4P0CG21 123 aaPredicted RBP6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 HTR2BP41595 481 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 NPBWR1P48145 328 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 MECP2P51608 486 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 PPP5CP53041 499 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 RELQ04864 619 aaPredicted RBP6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 ZNF57Q68EA5 555 aaPredicted RBP6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 ETFRF1Q6IPR1 90 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 SLC25A24Q6NUK1 477 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 OR2C3Q8N628 320 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 OR4D10Q8NGI6 311 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 TRIM63Q969Q1 353 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 MRGPRFQ96AM1 343 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 TP53RKQ96S44 253 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 SRRQ9GZT4 340 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 HIPK2Q9H2X6 1198 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 UFC1Q9Y3C8 167 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 TMED3Q9Y3Q3 217 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 U3KQ87 197 aa6.6□□□□□ -1.35
PPP4R1-210ENST00000578557 NBEAL1Q6ZS30 2694 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 TRRAPQ9Y4A5 3859 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 IGHV4OR15-8A0A075B7B6 117 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 A0A087WW49 117 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 TRAV25A0A0B4J276 109 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 K7EMT4 169 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 SAP30O75446 220 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 MED6O75586 246 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 OR2J3O76001 311 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 IGKV1-39P01597 117 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 IGHV3-11P01762 117 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 HLA-AP01891 365 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 IGKV1D-39P04432 117 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 CLEC3BP05452 202 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 P0C879 139 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 SULT1A3P0DMM9 295 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 SULT1A4P0DMN0 295 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 ARL3P36405 182 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 MFAP4P55083 255 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 CMC4P56277 68 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 ZNF79Q15937 498 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 ANKRD55Q3KP44 614 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 RNASE12Q5GAN4 147 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 LCN12Q6JVE5 192 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 PLET1Q6UQ28 207 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 CENPSQ8N2Z9 138 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 SLC35G3Q8N808 338 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 DUSP18Q8NEJ0 188 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 RNASEH2CQ8TDP1 164 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 MISP3Q96FF7 219 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 OR5B12Q96R08 314 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 C21orf62Q9NYP8 219 aa6.59□□□□□ -1.35
PPP4R1-210ENST00000578557 ZNF256Q9Y2P7 627 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms