RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 PRM2P04554 102 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 SERPINA7P05543 415 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 SERPINA6P08185 405 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 SULT1A3P0DMM9 295 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 SULT1A4P0DMN0 295 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 RNASE3P12724 160 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 KCNE1P15382 129 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 CR1P17927 2039 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 RPS4Y1P22090 263 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 FKBP2P26885 142 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 G6PCP35575 357 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 EIF2B2P49770 351 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 ZNF80P51504 273 aaPredicted RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 AP1S1P61966 158 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 RPL18Q07020 188 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 GRK1Q15835 563 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 NNATQ16517 81 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 ACOT6Q3I5F7 207 aaPredicted RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 Q6ZQT0 140 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 HEATR5AQ86XA9 2040 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 BPIFA4PQ86YQ2 179 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 C12orf45Q8N5I9 185 aaPredicted RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 TERB2Q8NHR7 220 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 PFN4Q8NHR9 129 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 MRPL30Q8TCC3 161 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 H1FXQ92522 213 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 TMA16Q96EY4 203 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 IMP4Q96G21 291 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 CCDC42Q96M95 316 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 TMEM147Q9BVK8 224 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 MRPS26Q9BYN8 205 aaKnown RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 FKBP14Q9NWM8 211 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 IDI2-AS1Q9NZ38 188 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 MED13Q9UHV7 2174 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 KMT2BQ9UMN6 2715 aaPredicted RBP0.51□□□□□ -2.33
TOP2A-202ENST00000577541 BAIAP2Q9UQB8 552 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 CYSLTR1Q9Y271 337 aa0.51□□□□□ -2.33
TOP2A-202ENST00000577541 RP1L1Q8IWN7 2480 aaPredicted RBP0.5□□□□□ -2.33
TOP2A-202ENST00000577541 PIK3C2GO75747 1445 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 TTC21AQ8NDW8 1320 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 TRGV2A0A075B6R0 118 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 TRBV10-2A0A0K0K1G8 114 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 CREBL2O60519 120 aaPredicted RBP0.5□□□□□ -2.33
TOP2A-202ENST00000577541 CRPP02741 224 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 CTSDP07339 412 aaPredicted RBP0.5□□□□□ -2.33
TOP2A-202ENST00000577541 MSMBP08118 114 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 CYBAP13498 195 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 SPI1P17947 270 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 PSMB8P28062 276 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 SRIP30626 198 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 CDKN2CP42773 168 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 SERPINB9P50453 376 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 CDC42P60953 191 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 MAGOHP61326 146 aaKnown RBP0.5□□□□□ -2.33
TOP2A-202ENST00000577541 CTAG1AP78358 180 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 CCL20P78556 96 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 ZNF345Q14585 488 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 ZNF846Q147U1 533 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 HIST3H3Q16695 136 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 GLT8D1Q68CQ7 371 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 TMEM42Q69YG0 159 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 CLVS1Q8IUQ0 354 aaPredicted RBP0.5□□□□□ -2.33
TOP2A-202ENST00000577541 TRAPPC5Q8IUR0 188 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 ANKRD29Q8N6D5 301 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 WFDC5Q8TCV5 224 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 ROPN1LQ96C74 230 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 DGCR14Q96DF8 476 aaKnown RBP0.5□□□□□ -2.33
TOP2A-202ENST00000577541 RETNLBQ9BQ08 111 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 PRELID3BQ9Y3B1 194 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
TOP2A-202ENST00000577541 BRWD1Q9NSI6 2320 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 TOPBP1Q92547 1522 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 NEO1Q92859 1461 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 FREM1Q5H8C1 2179 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 MICAL3Q7RTP6 2002 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 MYH11P35749 1972 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 TRAV1-1A0A0B4J248 108 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 IGKV1-9A0A0C4DH69 117 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 EXOC1LA0A1B0GW35 172 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 IRGMA1A4Y4 181 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 DPRXA6NFQ7 191 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 FABP5P3A8MUU1 101 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 TMEM114B3SHH9 223 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 ASAH2BP0C7U1 165 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HIST1H2BOP23527 126 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HIST1H2BBP33778 126 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 MAGEA12P43365 314 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HAAOP46952 286 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 SULT1A1P50225 295 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HIST1H2BDP58876 126 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HIST1H2BCP62807 126 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HBA1P69905 142 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 AKR1C1Q04828 323 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 CDK5R1Q15078 307 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 SURF2Q15527 256 aaPredicted RBP0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HIST2H2BEQ16778 126 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.49□□□□□ -2.33
TOP2A-202ENST00000577541 C9orf64Q5T6V5 341 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 LCN15Q6UWW0 184 aa0.49□□□□□ -2.33
TOP2A-202ENST00000577541 DHFR2Q86XF0 187 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms