RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-205	ENST00000577241	PRCD	Q00LT1	54 aa		12.03	□□□□□ -0.48
MSI2-205	ENST00000577241	KLF9	Q13886	244 aa	Predicted RBP	12.03	□□□□□ -0.48
MSI2-205	ENST00000577241	ZNF79	Q15937	498 aa		12.03	□□□□□ -0.48
MSI2-205	ENST00000577241	SP6	Q3SY56	376 aa		12.03	□□□□□ -0.48
MSI2-205	ENST00000577241	SLC25A24	Q6NUK1	477 aa		12.03	□□□□□ -0.48
MSI2-205	ENST00000577241	C19orf35	Q6ZS72	473 aa		12.03	□□□□□ -0.48
MSI2-205	ENST00000577241	RNASE11	Q8TAA1	199 aa	Known RBP	12.03	□□□□□ -0.48
MSI2-205	ENST00000577241	GLYATL2	Q8WU03	294 aa		12.03	□□□□□ -0.48
MSI2-205	ENST00000577241	TRIM63	Q969Q1	353 aa		12.03	□□□□□ -0.48
MSI2-205	ENST00000577241	LY86	O95711	162 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	IGKV1-5	P01602	117 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	IGLV1-51	P01701	117 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	OR5AC1	P0C628	307 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241		P0C879	139 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	ARL3	P36405	182 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	FAM106A	Q4KMX7	169 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	CLEC19A	Q6UXS0	136 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	GPHB5	Q86YW7	130 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	OR1P1	Q8NH06	330 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	RBPMS	Q93062	196 aa	Known RBP	12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	GALNT14	Q96FL9	552 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	CCDC140	Q96MF4	163 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	PLEKHA3	Q9HB20	300 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	CACFD1	Q9UGQ2	172 aa		12.02	□□□□□ -0.49
MSI2-205	ENST00000577241	DBX1	A6NMT0	343 aa		12.01	□□□□□ -0.49
MSI2-205	ENST00000577241	LGALS9	O00182	355 aa		12.01	□□□□□ -0.49
MSI2-205	ENST00000577241	ANXA3	P12429	323 aa		12.01	□□□□□ -0.49
MSI2-205	ENST00000577241	INPP1	P49441	399 aa		12.01	□□□□□ -0.49
MSI2-205	ENST00000577241	ZNF502	Q8TBZ5	544 aa		12.01	□□□□□ -0.49
MSI2-205	ENST00000577241	IL22RA2	Q969J5	263 aa		12.01	□□□□□ -0.49
MSI2-205	ENST00000577241	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12.01	□□□□□ -0.49
MSI2-205	ENST00000577241	GAR1	Q9NY12	217 aa	Known RBP	12.01	□□□□□ -0.49
MSI2-205	ENST00000577241	DMRT1	Q9Y5R6	373 aa		12.01	□□□□□ -0.49
MSI2-205	ENST00000577241		A0A0B4J293	547 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	MFSD2B	A6NFX1	497 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	PPP5D1	E7EU14	171 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	INS-IGF2	F8WCM5	200 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	IFNA17	P01571	189 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	CLEC3B	P05452	202 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	SRPX	P78539	464 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	OR2C3	Q8N628	320 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	SLC35G3	Q8N808	338 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	ZNF114	Q8NC26	417 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	OR2K2	Q8NGT1	345 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	PRR25	Q96S07	402 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	TMEM56-RWDD3	S4R434	201 aa		12	□□□□□ -0.49
MSI2-205	ENST00000577241	OR2C1	O95371	312 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	IGHV3-23	P01764	117 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	CSN3	P07498	182 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	GP9	P14770	177 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	SPN	P16150	400 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	SNCA	P37840	140 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	SUB1	P53999	127 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	ZNF57	Q68EA5	555 aa	Predicted RBP	11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	SPSB3	Q6PJ21	355 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	PLET1	Q6UQ28	207 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	IL34	Q6ZMJ4	242 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	BSCL2	Q96G97	398 aa	Predicted RBP	11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	SRR	Q9GZT4	340 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	C21orf62	Q9NYP8	219 aa		11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	LSM4	Q9Y4Z0	139 aa	Known RBP	11.99	□□□□□ -0.49
MSI2-205	ENST00000577241	PRKDC	P78527	4128 aa	Known RBP	11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	NAP1L6	A6NFF2	107 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	ST8SIA3	O43173	380 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	AKR1C4	P17516	323 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	GPR183	P32249	361 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	TMEM128	Q5BJH2	165 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	TMEM268	Q5VZI3	342 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	TRIQK	Q629K1	86 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	LCN12	Q6JVE5	192 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	SELENOH	Q8IZQ5	122 aa	Known RBP	11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	OR52E5	Q8NH55	327 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	B9D2	Q9BPU9	175 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	PALMD	Q9NP74	551 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	ENY2	Q9NPA8	101 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	SMAD5-AS1	Q9Y6J3	95 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241		S4R3C0	116 aa		11.98	□□□□□ -0.49
MSI2-205	ENST00000577241	TGOLN2	O43493	480 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	HLA-A	P01891	365 aa	Known RBP	11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	MFAP2	P55001	183 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	SPCS3	P61009	180 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	CD69	Q07108	199 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	TMEM187	Q14656	261 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	IZUMO4	Q1ZYL8	232 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	AARD	Q4LEZ3	155 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	SCARB1	Q8WTV0	552 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	TMEM230	Q96A57	120 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	TXN2	Q99757	166 aa		11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	TECR	Q9NZ01	308 aa	Known RBP	11.97	□□□□□ -0.49
MSI2-205	ENST00000577241	ZNF320	A2RRD8	509 aa		11.96	□□□□□ -0.49
MSI2-205	ENST00000577241	CENPX	A8MT69	81 aa		11.96	□□□□□ -0.49
MSI2-205	ENST00000577241		A8MWP6	167 aa		11.96	□□□□□ -0.49
MSI2-205	ENST00000577241		K7EIM0	57 aa		11.96	□□□□□ -0.49
MSI2-205	ENST00000577241	CORT	O00230	105 aa		11.96	□□□□□ -0.49
MSI2-205	ENST00000577241	FCGR2B	P31994	310 aa	Predicted RBP	11.96	□□□□□ -0.49
MSI2-205	ENST00000577241	HOXA1	P49639	335 aa	Predicted RBP	11.96	□□□□□ -0.49
MSI2-205	ENST00000577241	ELL	P55199	621 aa	Predicted RBP	11.96	□□□□□ -0.49
MSI2-205	ENST00000577241	RBMS2	Q15434	407 aa	Known RBP	11.96	□□□□□ -0.49
MSI2-205	ENST00000577241	LGI3	Q8N145	548 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms