RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PPP5D1E7EU14 171 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 LY86O95711 162 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 IGHV3-23P01764 117 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 P0C879 139 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 ARL3P36405 182 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 PRCDQ00LT1 54 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 SGPP2Q8IWX5 399 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 RNASE11Q8TAA1 199 aaKnown RBP17.95■□□□□ 0.46
SNF8-217ENST00000576353 VN1R17PQ8TDU5 208 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 GLYATL2Q8WU03 294 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 CCDC140Q96MF4 163 aa17.95■□□□□ 0.46
SNF8-217ENST00000576353 TGP01266 2768 aa17.94■□□□□ 0.46
SNF8-217ENST00000576353 IZUMO4Q1ZYL8 232 aa17.94■□□□□ 0.46
SNF8-217ENST00000576353 IL34Q6ZMJ4 242 aa17.94■□□□□ 0.46
SNF8-217ENST00000576353 FAM219AQ8IW50 185 aa17.94■□□□□ 0.46
SNF8-217ENST00000576353 SIGLEC8Q9NYZ4 499 aa17.94■□□□□ 0.46
SNF8-217ENST00000576353 A0A0B4J293 547 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 MFSD2BA6NFX1 497 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 OR2C1O95371 312 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 IGLV1-51P01701 117 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 CLEC3BP05452 202 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 SPNP16150 400 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 OR2C3Q8N628 320 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 OR1P1Q8NH06 330 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 ZNF502Q8TBZ5 544 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 RBPMSQ93062 196 aaKnown RBP17.93■□□□□ 0.46
SNF8-217ENST00000576353 PDCD10Q9BUL8 212 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 PLEKHA3Q9HB20 300 aa17.93■□□□□ 0.46
SNF8-217ENST00000576353 PRKDCP78527 4128 aaKnown RBP17.92■□□□□ 0.46
SNF8-217ENST00000576353 ERHP84090 104 aaKnown RBP17.92■□□□□ 0.46
SNF8-217ENST00000576353 GPHB5Q86YW7 130 aa17.92■□□□□ 0.46
SNF8-217ENST00000576353 SRRQ9GZT4 340 aa17.92■□□□□ 0.46
SNF8-217ENST00000576353 DNAH3Q8TD57 4116 aa17.91■□□□□ 0.46
SNF8-217ENST00000576353 IFNA17P01571 189 aa17.91■□□□□ 0.46
SNF8-217ENST00000576353 HLA-AP01891 365 aaKnown RBP17.91■□□□□ 0.46
SNF8-217ENST00000576353 CSN3P07498 182 aa17.91■□□□□ 0.46
SNF8-217ENST00000576353 MFAP2P55001 183 aa17.91■□□□□ 0.46
SNF8-217ENST00000576353 FAM106AQ4KMX7 169 aa17.91■□□□□ 0.46
SNF8-217ENST00000576353 SELENOHQ8IZQ5 122 aaKnown RBP17.91■□□□□ 0.46
SNF8-217ENST00000576353 GALNT14Q96FL9 552 aa17.91■□□□□ 0.46
SNF8-217ENST00000576353 LSM4Q9Y4Z0 139 aaKnown RBP17.91■□□□□ 0.46
SNF8-217ENST00000576353 TMEM56-RWDD3S4R434 201 aa17.91■□□□□ 0.46
SNF8-217ENST00000576353 LGALS9O00182 355 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 ST8SIA3O43173 380 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 AKR1C4P17516 323 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 INPP1P49441 399 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 TMEM268Q5VZI3 342 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 ZNF57Q68EA5 555 aaPredicted RBP17.9■□□□□ 0.46
SNF8-217ENST00000576353 SLC35G3Q8N808 338 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 ZNF114Q8NC26 417 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 IL22RA2Q969J5 263 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 TMEM230Q96A57 120 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 ATP6V0BQ99437 205 aa17.9■□□□□ 0.46
SNF8-217ENST00000576353 SLC25A21Q9BQT8 299 aaPredicted RBP17.9■□□□□ 0.46
SNF8-217ENST00000576353 A0A0G2JRQ6 117 aa17.89■□□□□ 0.45
SNF8-217ENST00000576353 GP9P14770 177 aa17.89■□□□□ 0.45
SNF8-217ENST00000576353 GPR183P32249 361 aa17.89■□□□□ 0.45
SNF8-217ENST00000576353 PLET1Q6UQ28 207 aa17.89■□□□□ 0.45
SNF8-217ENST00000576353 LHFPL5Q8TAF8 219 aa17.89■□□□□ 0.45
SNF8-217ENST00000576353 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.89■□□□□ 0.45
SNF8-217ENST00000576353 C21orf62Q9NYP8 219 aa17.89■□□□□ 0.45
SNF8-217ENST00000576353 INS-IGF2F8WCM5 200 aa17.88■□□□□ 0.45
SNF8-217ENST00000576353 ANXA3P12429 323 aa17.88■□□□□ 0.45
SNF8-217ENST00000576353 SNCAP37840 140 aa17.88■□□□□ 0.45
SNF8-217ENST00000576353 TMEM187Q14656 261 aa17.88■□□□□ 0.45
SNF8-217ENST00000576353 TRIQKQ629K1 86 aa17.88■□□□□ 0.45
SNF8-217ENST00000576353 HAPLN4Q86UW8 402 aa17.88■□□□□ 0.45
SNF8-217ENST00000576353 SCARB1Q8WTV0 552 aa17.88■□□□□ 0.45
SNF8-217ENST00000576353 ENY2Q9NPA8 101 aa17.88■□□□□ 0.45
SNF8-217ENST00000576353 ZNF320A2RRD8 509 aa17.87■□□□□ 0.45
SNF8-217ENST00000576353 SRPXP78539 464 aa17.87■□□□□ 0.45
SNF8-217ENST00000576353 SPINK9Q5DT21 86 aa17.87■□□□□ 0.45
SNF8-217ENST00000576353 PIGBOS1A0A0B4J2F0 54 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 K7EIM0 57 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 TGOLN2O43493 480 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 SPCS3P61009 180 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 CD69Q07108 199 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 BAK1Q16611 211 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 AARDQ4LEZ3 155 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 SPSB3Q6PJ21 355 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 Q6ZRM9 215 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 TMED4Q7Z7H5 227 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 OR2K2Q8NGT1 345 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 OR52E5Q8NH55 327 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 MISP3Q96FF7 219 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 BSCL2Q96G97 398 aaPredicted RBP17.86■□□□□ 0.45
SNF8-217ENST00000576353 B9D2Q9BPU9 175 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 ZC4H2Q9NQZ6 224 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 GAR1Q9NY12 217 aaKnown RBP17.86■□□□□ 0.45
SNF8-217ENST00000576353 CACFD1Q9UGQ2 172 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 SMAD5-AS1Q9Y6J3 95 aa17.86■□□□□ 0.45
SNF8-217ENST00000576353 IGHV3-21A0A0B4J1V1 117 aa17.85■□□□□ 0.45
SNF8-217ENST00000576353 NAP1L6A6NFF2 107 aa17.85■□□□□ 0.45
SNF8-217ENST00000576353 C2orf70A6NJV1 201 aa17.85■□□□□ 0.45
SNF8-217ENST00000576353 HOXA1P49639 335 aaPredicted RBP17.85■□□□□ 0.45
SNF8-217ENST00000576353 SUB1P53999 127 aaKnown RBP eCLIP17.85■□□□□ 0.45
SNF8-217ENST00000576353 SUPT4H1P63272 117 aaKnown RBP17.85■□□□□ 0.45
SNF8-217ENST00000576353 TMEM128Q5BJH2 165 aa17.85■□□□□ 0.45
SNF8-217ENST00000576353 LCN12Q6JVE5 192 aa17.85■□□□□ 0.45
SNF8-217ENST00000576353 SORL1Q92673 2214 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms